Protein Model on 7n9f_YA_4_XA_4 (TEMPLATE: 7n9f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(NUP98_HUMAN) YA 4 (c) polymer(polypeptide(L)) [559 aa] Nucleoporin 145c :NU145_YEAST
2 b XA 4 (b) polymer(polypeptide(L)) [675 aa] Nucleoporin NUP85 :NUP85_YEAST 1654L 1655A(S) 1656S(N) (identity: 33.3 %/24.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7n9f_YA_4 identity=24.9%
queryA      1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
                :**      *      * ***           *  * **       *  **  *    *  * *   **     * *   **  *        *      *:
7n9f_YA_4    264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358
SecStr          :HHHHHHHHHHHHTTHHHHHHHHT--T  SHHHHHHHHHHTT HHHHTTTTTTTT SSSSSS  - SS   SHHHHHHHHHHHHH S--SSS   TTHHHH:    
ExpBur          :bbbeebbebbeeebbeebeebbe--ebeeebbbbbbbbbeeeeeebeeebeeeeeeebbebbe-beeebeeebbeebeeebeebee--eeeeeeebebbb:    

queryA      1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
                :  ** * *   *   *     *   *   *   * *      *           *    *       *            *   *             **:
7n9f_YA_4    359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435
SecStr          :HHHTTTSSSSSSS SSS  --SSS HHHHHHHHHHSS SSSS HHHHHHHHHHH    TTS------TTHHHHH----HHH SSTHH-----------HH:    
ExpBur          :bbbbbebbbeeebbbeeee--ebbebbbbbbbbbbbbbbeeeebeebbeebbeebebeeee------bbbbbbb----bbbbeeebe-----------eb:    

queryA      1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
                :*           * *  *   **    * *   **       *           * ***   *     **          *     *  *   **     :
7n9f_YA_4    436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521
SecStr          :HH----------HHTTS - SS HHHHHHHHHHHHHHTSS   HHHHHHHHHHHHHHHTTTT HHHHHHHTTSS  TTHHHHHHHHHHHH SSSSSS---:    
ExpBur          :be----------ebeeee-ebbebbbbbbbbbbbbeeeebebeeebbeebbebbbebbbbbbebbbbbbbbbbbeeeebbeeebbebbbebbebbee---:    

queryA      1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692
                :          *  *   *  * *     *     *   *            *         *      *     *   *      **      *  *  *:
7n9f_YA_4    522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616
SecStr          :-SSSTTTSS SS   HHHHHHHHHHS  STTHHHHHHHHHTT   SS SSSSHHHHSS   S   TTHHHHHHHHTTTTTTS   TT  ---- SSSSTH:    
ExpBur          :-eebbeebbebebeeebbebbebeeeeeeeebeeebeebbebeebeeebbbbbbbbbeebebeeeeebbeebbebbebbeebeeeeeeb----eeebbbb:    
Contact         :                                                         bbbbbbb                                    

queryA      1693:YLDYIRVI:1700
                :   *    :
7n9f_YA_4    617:FEVYLKLV: 624
SecStr          :HHHGGGSS:    
ExpBur          :bbebbebe:

Input Residue Numbers for Focused Sites

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