CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | U 1 (CE) | polymer(polypeptide(L)) [543 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | V 1 (CF) | polymer(polypeptide(L)) [285 aa] | Protein SEC13 homolog :SEC13_HUMAN | 1514S 1577I 1587T 1622V 1626M 1627E 1656S 1733I 1734Q 1735C 1736Y (identity: 100.0 %/92.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7peq_U_1 identity=92.0% |
queryA 1213:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC:1312 :****************************************************************************************************: 7peq_U_1 333:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC: 432 SecStr : SHHHHHHHHTTEEEEE SS EEEEEE STT SGGGSTT SSSSSTTTTSHHHHHHHHHHHHHSS SS S SS SHHHHHHHHHHHHHHHH: ExpBur :eeeeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebbeebeeeeeeeeeeeeebeeeeeebeeebeeeeeeeeeeeeeeeeeeeebeeebeeeeeeebbe: queryA 1313:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE:1412 :****************************************************************************************************: 7peq_U_1 433:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE: 532 SecStr :HHHHHHTTHHHHHTTT TTHHHHHHGGGT HHHHHHHHHTTT SHHHHHTT S STHHHHHHHHHHHHHSTTTTTT HHHHHHHHHTTT SSSS ST: ExpBur :eeeeeeeeeeeeeeeeeeebebeebeeeebeeebbeebeeeeeeeebeeeeeeeeeeeebeebeeeeeebeeeeeeeeeeebeeeeebeeeebeeeeeee: queryA 1413:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEP:1512 :******************************************* **************************: 7peq_U_1 533:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHYDLNQLLEP: 632 SecStr :T GGGTTTS HHHHHHHHHSSS TTTS HHHHHHHHHHSS ------------------------------- SS HHHHHTTSSSGGGS HHHHHHH: ExpBur :beeeeeeeeeeeebeebeeeebbeeeeeeeeeeeeebeeeeee-------------------------------eeebeebeeeeeebebeeebeeeeee: queryA 1513:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP:1612 :****************************************************************************************************: 7peq_U_1 633:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP: 732 SecStr :HHTT S HHHHHHHHHHHHTTT S HHHHHHHHHHHHHHHHHHT SHHHHHHHHS S HHHHHHHHHHHHHH TTS TTT STTTTTGGGT : ExpBur :eeeeeeeeeebbebbebeebeeeeeeeeeeeeeeebbeebbeebeeeebbebbeebbeeeeeeeebeeeeeeebeeebeebbeeeebebeebbbeeebee: Contact : b b b queryA 1613:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS:1712 :****************************************************************************************************: 7peq_U_1 733:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS: 832 SecStr : HHHHHHHHHHHHHS HHHHHHHHHTTT SS HHHHHHHHGGG TT HHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHH SS S : ExpBur :eeebbebbbebeeeeeeeeebbeeebeeebbeeeeeebeebebeeeeeeeebeeebeebeeeeeebeeeeeeeeeeeeebeeebbeeeeeeeeeeeeeee: Contact : b bb b queryA 1713:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR:1802 :****************************************** ********************************: 7peq_U_1 833:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLXXXXXXXXXXXXXXXXSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR: 922 SecStr : SHHHHHHHHHHHHHTHHHHT HHHHHHHHHHH TTT----------------S TTTSTTTT S HHHHHH : ExpBur :eeeeeebeebbeeeeebeeeeeeeeeeebeeeeeeebeeeee----------------eeeeeeeeeeeeebeeeeeeeeeeeeeeeeee: Contact : bbbb |