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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | RC 8 (V2) | polymer(polypeptide(L)) [511 aa] | NUP96 | |
2 | b | VC 8 (W2) | polymer(polypeptide(L)) [274 aa] | SEC13 | 1513R 1514S(Q) 1550A(F) 1551S(A) 1554G(A) 1555Q 1557E 1558S(F) 1577I(A) 1588R 1589H(E) 1622V(L) 1625H(R) 1626M(Y) (identity: 28.6 %/26.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7tbk_RC_8 identity=26.4% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 7tbk_RC_8 173:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 267 SecStr :HHHHHHHHHHHHHHHHHHHHHHH--H HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHT-TTTS HHHHHHHHHHHHHHTT--T S HHHHHH: ExpBur :ebbeebbebbeeebbeebeeebe--ebeeebebbbbbbbbeebeebbebbeebeeeebbeebe-ebeebeeeebeebbeebeeeee--eeeeeeebbbeb: queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 7tbk_RC_8 268:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 344 SecStr :HHHHHT SSSSSS GGGGG--GTS HHHHHHHHHHSTTTTTS HHHHHHHHHTT TT ------HHHHHHH----HHHHGGGHH-----------HH: ExpBur :bbbbbbebbeeeeebeebe--eebebbbbbbbbbbbbbbeeeebeebbebbbeebebeeee------eebbbbe----bbbbeeebe-----------eb: queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 7tbk_RC_8 345:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 430 SecStr :HH----------HHHHH - SS HHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHHTTTTSS---: ExpBur :be----------ebeeeb-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbebebbbbbbbbbbbbbeeebbeebbeebbeebbeebee---: Contact : bb bb bb bb b bb queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * * * * * *: 7tbk_RC_8 431:-STNDHILNRLKIPSQLIFNAQALKDRYE: 458 SecStr :-SHHHHHHHTTT HHHHHHHHHHHHHHH: ExpBur :-eebbeebbebebbeebbeebeeeeeeee: Contact : b bb |