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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | O 1 (O) | polymer(polypeptide(L)) [637 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
2 | b | W 1 (W) | polymer(polypeptide(L)) [756 aa] | Nup358 :A0A1L8HGL2_XENLA | 1325T(Y) 1377M(L) 1384Q(K) 1389S(H) 1390F(Y) 1392Q 1457S(E) 1460D(E) 1472E 1473G(D) 1474S(C) 1475G 1476C(F) 1477V(S) 1478I(F) 1479A(G) 1480E(D) 1481E(D) (identity: 16.7 %/62.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vop_O_1 identity=62.9% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230 :* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** : 7vop_O_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336 SecStr : SS SSS B SSS S SS SSS S SSS SS S S B S S--SHHHHHHHHHHHHHHHEEE : ExpBur :eeeeeeeeeeeeeeebeeeeeebeeebebebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeee--ebeeebbebbebbeeebeeee: queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329 : ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* : 7vop_O_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436 SecStr : SSS EEE THHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHHHHTS HHHHHS S HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS STT: ExpBur :eeebbbbebeeeeebbbebbeebeeebeeeeeeeebbebbbbbbbbbeebbbebebeeeeeebeeeeeebebbbebbeebbeebbeebbeeeeeeeeeee: Contact : b queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429 : ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * : 7vop_O_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536 SecStr :HHHHHHHHHHHT HHHHHHHHHHT HHHHHHHHHHSS THHHHHHHHHHHHHHHHT TTTS HHHHHHHHHHHT SEEE TTS EEE S HHHHHH: ExpBur :eeebbebbbbebeeeebeeebeeeeeeeebeebeebeeeeeebeebeeebeeebeeeebeeeeeeebebebbbbbbeeeebeeebebebebeeebebbbb: Contact : b b bb b queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527 :***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********: 7vop_O_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636 SecStr :HHHHTTS TTS HHHHHHHHHHHHS SSS S HHHHHS S GGGSSS HHHHHHHHHH S SSSS GGGT SSS THHHHH: ExpBur :bbbebebeeebebeebbeebeebbeeeeeeebebbbbbbeebeeeeeeeeeeeebbeebeebbbbbbbbebeeeeebeeeebbebebbbeeebbebbbbb: Contact : b b bbbbbbbbbb queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** : 7vop_O_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736 SecStr :HHHHHHHHT S HHHHHHHHHHHHHHHHHHT SHHHHHHH S HHHHHHHHHHHHHHS SS HHHHHHHHHHHHHT THHHHHHHHHHHHHH: ExpBur :bbbbbbbbeeeeeeeeebeebbeebbbbbbebebebbbbbbbbbeeeeeebeeebeebbeeebebeebeebeeeeeebeeebebeeebbbbbbbeebeee: queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727 : *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***: 7vop_O_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836 SecStr : HHHHHHHHHHHT HHHHHHHHTTTHHHHHHHHT HHHHHHHHHHH SHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHT: ExpBur :eeeeebbebbbebeebeebbeebeeebbbebbeeeeeeebeeebeebeeeebbeeeeebeebbebbeebeebeebbeebeeeeeeeebbeebeeebeebe: queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPP:1765 : * ******* ***** ******* ******* **: 7vop_O_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPP: 874 SecStr :T S SSHHHHHHHHHHHHHHHHHHHHHHHHHS : ExpBur :eeeeebbeeeeebeebeeebeeeeeebeeebeeeeeee: |