Protein Model on 7vop_O_1_V_1 (TEMPLATE: 7vop )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(NUP98_HUMAN) O 1 (O) polymer(polypeptide(L)) [637 aa] Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR
2 b V 1 (V) polymer(polypeptide(L)) [772 aa] Nup358 :A0A1L8HGL2_XENLA 1287D(E) 1288S(A) 1289Q(S) 1290L 1291N(D) (identity: 20.0 %/62.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7vop_O_1 identity=62.9%
queryA      1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230
                :*  ** *****************   *  *      *     *    **** *   * ********* ***** *     *   *  ***  ** ***  :
7vop_O_1     239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336
SecStr          :   SS             SSS B  SSS      S  SS SSS     S SSS SS  S     S     B S   S--SHHHHHHHHHHHHHHHEEE  :    
ExpBur          :eeeeeeeeeeeeeeebeeeeeebeeebebebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeee--ebeeebbebbebbeeebeeee:    

queryA      1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329
                :   **   ** **  ***** **   *    *    ** * ******* *** ****   * ** **   **** *** **  **   *******     :
7vop_O_1     337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436
SecStr          : SSS  EEE   THHHHHHHHHHHHHHHHH  S HHHHHHHHHHHHHHHHTS  HHHHHS S   HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS STT:    
ExpBur          :eeebbbbebeeeeebbbebbeebeeebeeeeeeeebbebbbbbbbbbeebbbebebeeeeeebeeeeeebebbbebbeebbeebbeebbeeeeeeeeeee:    
Contact         :                                                         bbbbb                                      

queryA      1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429
                :  ********* *** ** *** ****** ***** **** ** * * *****  ** *  ** **** * ** * ***  *    *********** * :
7vop_O_1     437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536
SecStr          :HHHHHHHHHHHT  HHHHHHHHHHT HHHHHHHHHHSS THHHHHHHHHHHHHHHHT TTTS HHHHHHHHHHHT SEEE TTS EEE    S HHHHHH:    
ExpBur          :eeebbebbbbebeeeebeeebeeeeeeeebeebeebeeeeeebeebeeebeeebeeeebeeeeeeebebebbbbbbeeeebeeebebebebeeebebbbb:    

queryA      1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527
                :***** *****    ** *** ***       *** *** ***  *               **** ******* * *** *** * * * **********:
7vop_O_1     537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636
SecStr          :HHHHTTS TTS HHHHHHHHHHHHS SSS    S     HHHHHS     S GGGSSS     HHHHHHHHHH S    SSSS GGGT SSS  THHHHH:    
ExpBur          :bbbebebeeebebeebbeebeebbeeeeeeebebbbbbbeebeeeeeeeeeeeebbeebeebbbbbbbbebeeeeebeeeebbebebbbeeebbebbbbb:    

queryA      1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
                : * ** ********    * * **** ***  *************     ** ****** ***     *** *** ** * *  ** *** *****    :
7vop_O_1     637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736
SecStr          :HHHHHHHHT   S HHHHHHHHHHHHHHHHHHT SHHHHHHH   S HHHHHHHHHHHHHHS  SS  HHHHHHHHHHHHHT   THHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbeeeeeeeeebeebbeebbbbbbebebebbbbbbbbbeeeeeebeeebeebbeeebebeebeebeeeeeebeeebebeeebbbbbbbeebeee:    

queryA      1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727
                : *** *** * *   ** ****  **** ** ***** ** ***  ** **    ****** * ****** *****  * *  ***  ** ** ** ***:
7vop_O_1     737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836
SecStr          :  HHHHHHHHHHHT HHHHHHHHTTTHHHHHHHHT HHHHHHHHHHH SHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHS   HHHHHHHHHHHHHHT:    
ExpBur          :eeeeebbebbbebeebeebbeebeeebbbebbeeeeeeebeeebeebeeeebbeeeeebeebbebbeebeebeebbeebeeeeeeeebbeebeeebeebe:    

queryA      1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPP:1765
                :   * ******* ***** ******* *******  **:
7vop_O_1     837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPP: 874
SecStr          :T  S    SSHHHHHHHHHHHHHHHHHHHHHHHHHS  :    
ExpBur          :eeeeebbeeeeebeebeeebeeeeeebeeebeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123