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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | O 1 (O) | polymer(polypeptide(L)) [637 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
2 | b | Q 1 (Q) | polymer(polypeptide(L)) [780 aa] | Nuclear pore complex protein :A2RV69_XENLA | 1296Y 1343I 1351Q 1356H 1357R 1359A(S) 1360L 1363S 1364Q 1366V 1367G 1368S 1371V 1374L 1378Q 1382W 1390F(Y) 1391I 1392Q (identity: 89.5 %/62.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vci_O_1 identity=62.9% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230 :* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** : 7vci_O_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336 SecStr : SS EEETTTEEEESS SSS S S BTTTB TTSS SS S S EEEE S--SHHHHHHHHHHHHHHSEEEE : ExpBur :eeeeeeeeeeeeeeeeebebebeebeeeeeeeeeeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee--eeeeebeebbebbeebbeeee: queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329 : ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* : 7vci_O_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436 SecStr : SSS EEEE SHHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHHHT STTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSS: ExpBur :eeebbbbeeeeeeebbeebbeebeeeeeebeebeeebebbbeebbbbbbbbbeeeebeeeeeeeeeeeeeebbbebbeebbeebbeebeeebeeeeeeee: Contact : b queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429 : ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * : 7vci_O_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536 SecStr :HHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHHHHHHHHHTGGGGS HHHHHHHHHHHT SEEE TT EEE S HHHHHH: ExpBur :ebebebbbbbeebeeebeeebeeeeeeeebeebeebeeeeebeeebeeebeeeeeeeebeeeeeeebbbebbbbeeebbebeeeeebebbeebbbbbbbb: Contact : b b bb bb bb bbb b b b b bbb queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527 :***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********: 7vci_O_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636 SecStr :HHHHHTS TTS SHHHHHHHHHHHS SSSS S HHHHTT S HHHHHSS HHHHHHHHHH SSS SSS GGGTSSSS THHHHH: ExpBur :bbbbbeeeeeeebeebeeebeeebeeeeeeebebbbbbbbebeeeeebebeeeeebeeebeebbbbbbeebeeeeeeeeeebeebebbbeeeebebbbbb: queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** : 7vci_O_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736 SecStr :HHHHHHHTT S HHHHHHHHHHHHHHHHHHT HHHHHHHHTTS HHHHHHHHHHHHHHS S HHHHHHHHHHHHTS HHHHHHHHHHHHHHH: ExpBur :bbbbbebbebeeeeeeebeebbeebbbbbeeeebbbebbbbbbbbeeeeebebebeebbeeebeeeeeeebeebeebbeeebebeeebbeebbbeebeee: queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727 : *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***: 7vci_O_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836 SecStr : HHHHHHHHHHHT HHHHHHHHTTTHHHHHHHHT HHHHHHHHHHHT HHHHTT SSTTTTHHHHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHHH: ExpBur :eeeeebbebbbeeeeeeebeeebeeeebbebeeeeeeeebeebbeebbeeebbeebeebeebbebbeebbebeebbeebeeeeebeeebeebeeebeebe: queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPP:1765 : * ******* ***** ******* ******* **: 7vci_O_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPP: 874 SecStr :TTSTTS SSHHHHHHHHHHHHHHHHHHHHHHHHTS : ExpBur :eebeeebeeeeebeebbeebeeebeebeeebeeeeeee: |