Protein Model on 7vci_O_1_P_1
(TEMPLATE: 
7vci
)Protein Model on 7vci_O_1_P_1
(TEMPLATE: 7vci
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | O 1 (O) | polymer(polypeptide(L)) [637 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
| 2 | b | P 1 (P) | polymer(polypeptide(L)) [294 aa] | GATOR complex protein SEC13 :Q7ZYJ8_XENLA | 1140G 1141R 1142S 1143F 1144R 1145V 1146G 1147W 1148G 1149P 1150N 1151W 1154A(V) 1156S(N) 1157G 1158E(D) 1159Q(K) 1192S 1193P 1194F 1195K 1232E(G) 1233L(P) 1234C 1507N(C) 1508Q 1510L 1511E(D) 1522Y 1543Q(H) 1547V(M) 1573D(Q) 1574N(D) 1575S(P) 1576G(H) 1577I(V) 1579E 1584E 1587T(N) 1622V 1625H(R) 1626M(R) 1627E(D) (identity: 55.8 %/62.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7vci_O_1 identity=62.9% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230
:* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** :
7vci_O_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336
SecStr : SS EEETTTEEEESS SSS S S BTTTB TTSS SS S S EEEE S--SHHHHHHHHHHHHHHSEEEE :
ExpBur :eeeeeeeeeeeeeeeeebebebeebeeeeeeeeeeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee--eeeeebeebbebbeebbeeee:
Contact : bbbbbbbbbbbb b bbbb bbbb
queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329
: ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* :
7vci_O_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436
SecStr : SSS EEEE SHHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHHHT STTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSS:
ExpBur :eeebbbbeeeeeeebbeebbeebeeeeeebeebeeebebbbeebbbbbbbbbeeeebeeeeeeeeeeeeeebbbebbeebbeebbeebeeebeeeeeeee:
Contact : bbb
queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429
: ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * :
7vci_O_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536
SecStr :HHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHHHHHHHHHTGGGGS HHHHHHHHHHHT SEEE TT EEE S HHHHHH:
ExpBur :ebebebbbbbeebeeebeeebeeeeeeeebeebeebeeeeebeeebeeebeeeeeeeebeeeeeeebbbebbbbeeebbebeeeeebebbeebbbbbbbb:
queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527
:***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********:
7vci_O_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636
SecStr :HHHHHTS TTS SHHHHHHHHHHHS SSSS S HHHHTT S HHHHHSS HHHHHHHHHH SSS SSS GGGTSSSS THHHHH:
ExpBur :bbbbbeeeeeeebeebeeebeeebeeeeeeebebbbbbbbebeeeeebebeeeeebeeebeebbbbbbeebeeeeeeeeeebeebebbbeeeebebbbbb:
Contact : bb bb b
queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
: * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** :
7vci_O_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736
SecStr :HHHHHHHTT S HHHHHHHHHHHHHHHHHHT HHHHHHHHTTS HHHHHHHHHHHHHHS S HHHHHHHHHHHHTS HHHHHHHHHHHHHHH:
ExpBur :bbbbbebbebeeeeeeebeebbeebbbbbeeeebbbebbbbbbbbeeeeebebebeebbeeebeeeeeeebeebeebbeeebebeeebbeebbbeebeee:
Contact : b b bbbbb b b b b bbb
queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727
: *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***:
7vci_O_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836
SecStr : HHHHHHHHHHHT HHHHHHHHTTTHHHHHHHHT HHHHHHHHHHHT HHHHTT SSTTTTHHHHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHHH:
ExpBur :eeeeebbebbbeeeeeeebeeebeeeebbebeeeeeeeebeebbeebbeeebbeebeebeebbebbeebbebeebbeebeeeeebeeebeebeeebeebe:
queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPP:1765
: * ******* ***** ******* ******* **:
7vci_O_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPP: 874
SecStr :TTSTTS SSHHHHHHHHHHHHHHHHHHHHHHHHTS :
ExpBur :eebeeebeeeeebeebbeebeeebeebeeebeeeeeee:
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[assembly_id:1]
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