Protein Model on 7r5k_NB_1 focusing on 1474-th site
(TEMPLATE: 
7r5k
)Protein Model on 7r5k_NB_1 focusing on 1474-th site
(TEMPLATE: 7r5k
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(7r5k_NB auth_asym_id:M3) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 1474 | S | 594 | 594 | S | S | e | 56.2 |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(NUP98_HUMAN) | NB 1 (M3) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7r5k_NB_1 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211
:************************************************* ******************:
7r5k_NB_1 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331
SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEE SS --------------------------------- EEE SSS HHHH:
ExpBur :eeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeebeeebeeeeeeee:
queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311
:****************************************************************************************************:
7r5k_NB_1 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431
SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSTHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHTS SSSTT SS HHHHHHHHHHHHHHHHH:
ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbebbebbebbbbebeebeeeeeeeeeeeeeebbbebbbebbb:
queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411
:****************************************************************************************************:
7r5k_NB_1 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531
SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T:
ExpBur :ebbeeebeeebeebeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe:
queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511
:****************************************************************************************************:
7r5k_NB_1 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631
SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHHTTS SS S GGGTTS SS S HHHHHHHHHH TTS SHHHHS:
ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeeeebeebbeebbebbeeeeeeeebbbbebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe:
queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611
:****************************************************************************************************:
7r5k_NB_1 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731
SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS :
ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbeebbbbbbbbbbbbeeeeebbebbeebbeebbebeeeeebeebbbbbeeebeb:
queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711
:****************************************************************************************************:
7r5k_NB_1 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831
SecStr : HHHHHHHHHHHHHHHT HHHHHHHHHTTT HHHHHHHHHHHTTTHHHHTT HHHHHHHHHHH SHHHHTTSTT TTTHHHHHHHHHHHHHHHHHTTS :
ExpBur :eeebbbebbbeebeeeeeebebbebbbeeeebeebbebbbeebbbebbeeeebeebeebbeebeeeeebeebeebeebbebbbbbbebbebbeebeeeee:
queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811
:****************************************************************************************************:
7r5k_NB_1 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931
SecStr : HHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHS TT TTSS HHHHHHHHTTS TTHHHHHHHHHHHHHHHH:
ExpBur :eeeebeebeeebeebbebbeebeeeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeebbeebebeeebeeebeebbeebeeee:
queryA 1812:LAVGSL:1817
:******:
7r5k_NB_1 932:LAVGSL: 937
SecStr :HHTS :
ExpBur :eeeeee:
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[assembly_id:1]
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