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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | NB 5 (M3) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | HC 5 (R3) | polymer(polypeptide(L)) [1399 aa] | Nuclear pore complex protein Nup160 :NU160_HUMAN | 1112R 1113R 1114Q 1115L 1116G 1117L 1118V 1122K 1123S 1124V 1125T 1131L 1132L 1133M 1134D 1135M 1136A 1137L 1140G 1660I 1661N 1662E 1738A 1739K 1798M 1799D 1802R 1805T 1806Q 1809L 1810R 1813A 1816S (identity: 100.0 %/95.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7r5k_NB_5 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211 :************************************************* ******************: 7r5k_NB_5 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331 SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEE SS --------------------------------- EEE SSS HHHH: ExpBur :eeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeebeeebeeeeeeee: Contact :bbbbbbb bbbb bbbbbbb b queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311 :****************************************************************************************************: 7r5k_NB_5 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431 SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSTHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHTS SSSTT SS HHHHHHHHHHHHHHHHH: ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbebbebbebbbbebeebeeeeeeeeeeeeeebbbebbbebbb: queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411 :****************************************************************************************************: 7r5k_NB_5 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531 SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T: ExpBur :ebbeeebeeebeebeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe: queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511 :****************************************************************************************************: 7r5k_NB_5 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631 SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHHTTS SS S GGGTTS SS S HHHHHHHHHH TTS SHHHHS: ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeeeebeebbeebbebbeeeeeeeebbbbebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe: queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611 :****************************************************************************************************: 7r5k_NB_5 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731 SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS : ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbeebbbbbbbbbbbbeeeeebbebbeebbeebbebeeeeebeebbbbbeeebeb: queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711 :****************************************************************************************************: 7r5k_NB_5 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831 SecStr : HHHHHHHHHHHHHHHT HHHHHHHHHTTT HHHHHHHHHHHTTTHHHHTT HHHHHHHHHHH SHHHHTTSTT TTTHHHHHHHHHHHHHHHHHTTS : ExpBur :eeebbbebbbeebeeeeeebebbebbbeeeebeebbebbbeebbbebbeeeebeebeebbeebeeeeebeebeebeebbebbbbbbebbebbeebeeeee: Contact : bbb queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811 :****************************************************************************************************: 7r5k_NB_5 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931 SecStr : HHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHS TT TTSS HHHHHHHHTTS TTHHHHHHHHHHHHHHHH: ExpBur :eeeebeebeeebeebbebbeebeeeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeebbeebebeeebeeebeebbeebeeee: Contact : bb bb b bb bb queryA 1812:LAVGSL:1817 :******: 7r5k_NB_5 932:LAVGSL: 937 SecStr :HHTS : ExpBur :eeeeee: Contact : b b |