Protein Model on 7r5k_MB_5_IB_5
(TEMPLATE: 
7r5k
)Protein Model on 7r5k_MB_5_IB_5
(TEMPLATE: 7r5k
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | MB 5 (M2) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
| 2 | b | IB 5 (L2) | polymer(polypeptide(L)) [782 aa] | Nuclear pore complex protein Nup107 :NU107_HUMAN | 1294R 1296Y 1297I 1354G 1355D 1356H 1357R 1360L 1361L 1363S 1364Q 1366V 1367G 1368S 1370S 1371V 1374L 1375L 1377M 1378Q 1390F 1391I 1438P 1439T (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7r5k_MB_5 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211
:************************************************* ******************:
7r5k_MB_5 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331
SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEE SS --------------------------------- EEE SSS HHHH:
ExpBur :eeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeeeeeebeeeeeeee:
queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311
:****************************************************************************************************:
7r5k_MB_5 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431
SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSTHHHHHHHHHHHHTTT TTHHHHHHHHHHHHHHHHHT SSSGGG SS HHHHHHHHHHHHHHHHH:
ExpBur :bebbeebbebbbebbeeeeeeebbebebeeeeebbbebbebbeebeeeeebeebbebbbebbebbebbbbbeeebeeeeeeeeeebeeebbbebbbebbb:
Contact : b bb
queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411
:****************************************************************************************************:
7r5k_MB_5 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531
SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T:
ExpBur :ebbeeebeeebeebeeebebebbbbbbbbebbeebbebbeeeebeebbeebeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe:
Contact : bbbb bb bb bbb bb bb bb bb
queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511
:****************************************************************************************************:
7r5k_MB_5 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631
SecStr :TS EEETTTT HHHHHHHHHHTSS TT HHHHHHHHHHHHS SS S TTTTTS SS S HHHHHHHHHH TTS SHHHHS:
ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeeeebeebbebbbebbeeeeeeeebbeebbbeeeeeeeeeeeeeeeeeeeebbbbbbbbebeeeeebebeebbe:
Contact : bb
queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611
:****************************************************************************************************:
7r5k_MB_5 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731
SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS :
ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbbebbbbbbbbbbbbeeeeebbeebeebbeebbebeeeeebeebbbbbeeebeb:
queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711
:****************************************************************************************************:
7r5k_MB_5 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831
SecStr : HHHHHHHHHHHHHHT HHHHHHHHHTTT HHHHHHHHHHHTHHHHHHTT HHHHHHHHHHH SHHHHTT TT TTTHHHHHHHHHHHHHHHHHTTS :
ExpBur :eeebbbebbbeebeeeeeeeebbebbbeeeebeebbebbbeebbbebbeeeebeebbebbeebeeeebbeebeebeebbbbbbbbbebbebbeebeeeee:
queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811
:****************************************************************************************************:
7r5k_MB_5 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931
SecStr : HHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHS TT GGGS HHHHHHHHTTS HHHHHHHHHHHHHHHHHH:
ExpBur :eeeebeebeeebeebbebbeebebeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeebeeebeeebeebeeee:
queryA 1812:LAVGSL:1817
:******:
7r5k_MB_5 932:LAVGSL: 937
SecStr :HHTT :
ExpBur :eeeeee:
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[assembly_id:1]
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