Protein Model on 7r5j_MB_3_GC_3
(TEMPLATE: 
7r5j
)Protein Model on 7r5j_MB_3_GC_3
(TEMPLATE: 7r5j
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | MB 3 (M2) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
| 2 | b | GC 3 (R2) | polymer(polypeptide(L)) [1399 aa] | Nuclear pore complex protein Nup160 :NU160_HUMAN | 1112R 1113R 1114Q 1115L 1116G 1117L 1118V 1122K 1123S 1124V 1125T 1131L 1132L 1133M 1134D 1135M 1136A 1137L 1140G 1660I 1661N 1738A 1739K 1741R 1793P 1794E 1795D 1798M (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7r5j_MB_3 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211
:************************************************* ******************:
7r5j_MB_3 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331
SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEEESSS --------------------------------- EEEE SSS HHHH:
ExpBur :eeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeebeeebeeeeeeee:
Contact :bbbbbbb bbbb bbbbbbb b
queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311
:****************************************************************************************************:
7r5j_MB_3 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431
SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSTHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHTS SSSTT SS HHHHHHHHHHHHHHHHH:
ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbebbebbebbbbeeeebeeeeeeeeeeeeebbbbeebbebbb:
queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411
:****************************************************************************************************:
7r5j_MB_3 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531
SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T:
ExpBur :ebbbeebeeebeebeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe:
queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511
:****************************************************************************************************:
7r5j_MB_3 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631
SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHTTTS SS S STTTTTS SS S HHHHHHHHHH TTS SHHHHS:
ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeeeebeebbeebbebbeeeeeeeebbbeebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe:
queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611
:****************************************************************************************************:
7r5j_MB_3 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731
SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS :
ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbeebbbbbbbbbbbbeeeeebbebbeebbeebbebeeeeebeebbbbbeeebeb:
queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711
:****************************************************************************************************:
7r5j_MB_3 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831
SecStr : HHHHHHHHHHHHHHTT HHHHHHHHTTTT THHHHHHHHHHTHHHHHHTT HHHHHHHHHHH SHHHHTTSTT TTTHHHHHHHHHHHHHHHHHTTS :
ExpBur :eeebbbbbbbeebeeeeebeebbebbeebebeeebbebbbeebbbebbeeeebeebbebbeebeeeeebeebeebeebbbbbbbbbebbebbeebeeeee:
Contact : bb
queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811
:****************************************************************************************************:
7r5j_MB_3 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931
SecStr : HHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHS TT GGGS HHHHHHHHTT HHHHHHHHHHHHHHHHHH:
ExpBur :eeeebeebeeebeebbebbeebeeeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeeeeeebeeebeebeeee:
Contact : bb b bbb b
queryA 1812:LAVGSL:1817
:******:
7r5j_MB_3 932:LAVGSL: 937
SecStr :HHTT :
ExpBur :eeeeee:
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[assembly_id:1]
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