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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | M 4 (n) | polymer(polypeptide(L)) [557 aa] | Nucleoporin 145c :NU145_YEAST | |
2 | b | N 4 (o) | polymer(polypeptide(L)) [274 aa] | Protein transport protein SEC13 :SEC13_YEAST | 1514S(Q) 1547V(E) 1550A(F) 1554G(A) 1557E 1558S(F) 1580K(D) 1581A(T) 1584E(R) 1587T(M) 1588R 1589H(E) 1590C(I) 1619A 1622V(L) 1623R(K) 1625H(R) 1626M(Y) 1627E (identity: 21.1 %/24.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7n84_M_4 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 7n84_M_4 264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358 SecStr :HHHHHHHHHHHHHTHHHHHHHHH--S HHHHHHHHHHTT SHHHHHHHHHTT HHHHHHHT-T S HHHHHHHHHHHHHHHS--S S HHHHHH: ExpBur :ebbeebbebbbeebbeebeeeee--eeeeebebbbbbbbeeeeeebbebbeeeeeeebbebbe-ebeebeeebeeebeeebeeeee--eeeeeeebebbb: queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 7n84_M_4 359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435 SecStr :HHHHTT SSSSS TTS--SSS HHHHHHHHHHHS SSSS HHHHHHHHHHHS SS ------HHHHHHH----HHHT TTHH-----------HH: ExpBur :bbbbbbbbbeeeeebeebe--eebebbbbbbbbbbbbbebeeebeebbeebbeebebeeee------ebbbbbb----bbbbbeebe-----------eb: queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 7n84_M_4 436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521 SecStr :HH----------HHTTT - SS HHHHHHHHHHHHSS SS HHHHHHHHHHHHHHHHTTT HHHHHHHHTT STTHHHHHHHHHHHH SGGGSS---: ExpBur :be----------ebeeeb-eebbbbbbbbbbbbbbeeeebebeeebbbebbeebbebbbbeebbbbbbbbbbbbbeeeebeebbeebbeebbeebee---: Contact : b b b b bb bb b bbbb queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692 : * * * * * * * * * * * * * ** * * *: 7n84_M_4 522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616 SecStr :-SHHHHHHHHSS HHHHHHHHHHS SSSSGGGTSGGGTTT SSSS THHHHTTSSTTSSS HHHHTTTTTSSSHHHHS TT ---- SSTTSH: ExpBur :-eebbbebbeeebeeebbebbebeeeeeeeebeebbbebbeeebbebbbbbbbbbbbeebeeeeeeebbeebbebbebbeeeeeeeebe----beebbbb: Contact : b bb bbb b queryA 1693:YLDYIRVI:1700 : * : 7n84_M_4 617:FEVYLKLV: 624 SecStr :HHHHHHHH: ExpBur :bebbbebe: |