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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | M 7 (n) | polymer(polypeptide(L)) [557 aa] | Nucleoporin 145c :NU145_YEAST | |
2 | b | A 7 (X) | polymer(polypeptide(L)) [1137 aa] | Nucleoporin NUP188 :NU188_YEAST | 1373E(D) 1376T(E) 1377M(L) 1380V(Q) 1381D(K) 1384Q(T) 1407V(F) 1408W(E) 1409Q(G) 1410L 1412E(S) (identity: 9.1 %/24.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7n84_M_7 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 7n84_M_7 264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358 SecStr :HHHHHHHHHHHHHTHHHHHHHHH--S HHHHHHHHHHTT SHHHHHHHHHTT HHHHHHHT-T S HHHHHHHHHHHHHHHS--S S HHHHHH: ExpBur :ebbeebbebbbeebbeebeeeee--eeeeebebbbbbbbeeeeeebbebbeeeeeeebbebbe-ebeebeeebeeebeeebeeeee--eeeeeeebebbb: Contact : b bb bb b queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 7n84_M_7 359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435 SecStr :HHHHTT SSSSS TTS--SSS HHHHHHHHHHHS SSSS HHHHHHHHHHHS SS ------HHHHHHH----HHHT TTHH-----------HH: ExpBur :bbbbbbbbbeeeeebeebe--eebebbbbbbbbbbbbbebeeebeebbeebbeebebeeee------ebbbbbb----bbbbbeebe-----------eb: Contact : bbbb b queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 7n84_M_7 436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521 SecStr :HH----------HHTTT - SS HHHHHHHHHHHHSS SS HHHHHHHHHHHHHHHHTTT HHHHHHHHTT STTHHHHHHHHHHHH SGGGSS---: ExpBur :be----------ebeeeb-eebbbbbbbbbbbbbbeeeebebeeebbbebbeebbebbbbeebbbbbbbbbbbbbeeeebeebbeebbeebbeebee---: queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692 : * * * * * * * * * * * * * ** * * *: 7n84_M_7 522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616 SecStr :-SHHHHHHHHSS HHHHHHHHHHS SSSSGGGTSGGGTTT SSSS THHHHTTSSTTSSS HHHHTTTTTSSSHHHHS TT ---- SSTTSH: ExpBur :-eebbbebbeeebeeebbebbebeeeeeeeebeebbbebbeeebbebbbbbbbbbbbeebeeeeeeebbeebbebbebbeeeeeeeebe----beebbbb: queryA 1693:YLDYIRVI:1700 : * : 7n84_M_7 617:FEVYLKLV: 624 SecStr :HHHHHHHH: ExpBur :bebbbebe: |