[pdbjlvh2]Protein Model on 7peq_L_7_K

Protein Model on 7peq_L_7_K_7 (TEMPLATE: 7peq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(NUP98_HUMAN)	L 7 (BE)	polymer(polypeptide(L)) [543 aa]	Nuclear pore complex protein Nup96 :NUP98_HUMAN
2	b		K 7 (BD)	polymer(polypeptide(L)) [678 aa]	Nuclear pore complex protein Nup107 :NU107_HUMAN	1356H 1359A (identity: 100.0 %/92.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7peq_L_7 identity=92.0%

queryA      1213:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC:1312
                :****************************************************************************************************:
7peq_L_7     333:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC: 432
SecStr          :   HHHHHHHHTTEEEEE SS EEEEEES   STT SSSSSTT SSSSS STTSHHHHHHHHHHHHHSS    SS  S  SS SHHHHHHHHHHHHHHHH:    
ExpBur          :eeeeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebbeebeeeeeeeeeeeeebeebeeebeeebeeeeeeeeeeeeeeeeeeeebeeebbeeeeeebbe:    

queryA      1313:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE:1412
                :****************************************************************************************************:
7peq_L_7     433:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE: 532
SecStr          :HHHHHHTTHHHHHTTT TTHHHHHHHTTT HHHHHHHHHTTS SHHHHHHTT S  STHHHHHHHHHHHHHTTSTT    HHHHHHHHHTTT SSSS SS:    
ExpBur          :eeeeeeeeeeeebeeeeeebebeebeeeebeeebbeebeeeeeeeebeeeeeeeeeeeebeebeeeeeebeeeeeeeeeeebeeeeebeeeebeeeebee:    
Contact         :                                           b  b                                                     

queryA      1413:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEP:1512
                :*******************************************                               **************************:
7peq_L_7     533:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHYDLNQLLEP: 632
SecStr          :S SGGGTTTS HHHHHHHHHSSS TTTS HHHHHHHHHHSS  ------------------------------- SS HHHHHTTSSSTTSS HHHHHHH:    
ExpBur          :beeeeeeeeeeeebeebeeeebbeeeeeeeeeeeeebeeeeee-------------------------------eeeeeebeeeeeebebeeebeeeeee:    

queryA      1513:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP:1612
                :****************************************************************************************************:
7peq_L_7     633:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP: 732
SecStr          :HHTT   S HHHHHHHHHHHHTTT S   HHHHHHHHHHHHHHHHHHT SHHHHHHHHS S HHHHHHHHHHHHHH  TTSSSSSS   SS HHHHTS  :    
ExpBur          :eeeeeeeeeebbebbebeebeeeeeeeeeeeeeeebbeebbeebeeeebbebbeebbbeeeeeeebeeeeeebbeeebeebbeeeebebeeebeeeebee:    

queryA      1613:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS:1712
                :****************************************************************************************************:
7peq_L_7     733:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS: 832
SecStr          :HHHHHHHHHHHHHHHS HHHHSHHHHTTT  SS HHHHHHHHGGG   TT  HHHHHHHHHHHHHHHHTT  S  SHHHHHHHHHHHHHHHHH SS    :    
ExpBur          :eeebbebbbebeeeeeebeebbeebbeeebbeeeeeebeebeeeeeeeeeebeeeeeebeeeeeebeeeeeeeeeeeeebeebbbeeeeebeeeeeeeee:    

queryA      1713:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR:1802
                :******************************************                ********************************:
7peq_L_7     833:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLXXXXXXXXXXXXXXXXSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR: 922
SecStr          : SHHHHHHHHHHHHHHHHHSS    HHHHHHHHHHHHTTTTT----------------S  S      TTTSSSS SSS  S    SS  :    
ExpBur          :eeeeeebeebbeeeeebeeeeeeeeeeebebbeebeebeeeb----------------eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee:

Protein Model on 7peq_L_7_K_7 (TEMPLATE: 7peq )

Input Residue Numbers for Focused Sites