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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | KB 8 (M0) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | U 1 (A5) | polymer(polypeptide(L)) [726 aa] | Nuclear pore complex protein Nup93 :NUP93_HUMAN | 1377M 1435L 1436L 1437P 1440A 1443S 1444R 1447S 1448M 1498L 1499Y 1500S 1501D 1502R 1503H 1504Y 1536N 1537Y 1538T 1539H 1541S (identity: 100.0 %/95.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7r5k_KB_8 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211 :************************************************* ******************: 7r5k_KB_8 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331 SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEE SS --------------------------------- EEE SSS HHHH: ExpBur :eeeeeeeeeeebebeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeeeeeebeeeeeeeb: queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311 :****************************************************************************************************: 7r5k_KB_8 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431 SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSHHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHHS SSSTT SS HHHHHHHHHHHHHHHHH: ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbbbbbbbbbbbbbbeebeeeeeeeeeeeeebbbbebbbebbb: queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411 :****************************************************************************************************: 7r5k_KB_8 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531 SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T: ExpBur :ebbbeebeeebeeeeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe: Contact : b queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511 :****************************************************************************************************: 7r5k_KB_8 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631 SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHHHHS SS S GGGTTS SS S HHHHHHHHHH TTS SHHHHS: ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeebebeebbebbbebbeeeeeeeebbbeebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe: Contact : bbb b bb bb bbbbbbb queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611 :****************************************************************************************************: 7r5k_KB_8 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731 SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS : ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbbebbbbbbbbbbbbeeeeebbeebeebbeebbebeeeeebeebbbbbeeebeb: Contact : bbbb b queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711 :****************************************************************************************************: 7r5k_KB_8 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831 SecStr : THHHHHHHHHHHHHT HHHHHHHHHTTS THHHHHHHHHHTHHHHHHTT HHHHHHHHHHH STTTGGGSTT TTTHHHHHHHHHHHHHHHHHTTS : ExpBur :eeebbbebbbeebeeeeeeeeebebeeeeeebbeebeebbeeebbebbeeeebeebeeebeebeeeeebeebeebeebbbbbbbbbebbebbeebeeeee: queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811 :****************************************************************************************************: 7r5k_KB_8 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931 SecStr : HHHHHHHHHHHHHHHHHHTT STTHHHHHHHHHHHHHHHHHHHHHHHS TT TTSS HHHHHHHHTT HHHHHHHHHHHHHHHHHH: ExpBur :eeeebeebeeebeebbebbeebebeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeeeeeebeeebeebeeeb: queryA 1812:LAVGSL:1817 :******: 7r5k_KB_8 932:LAVGSL: 937 SecStr :HHTT : ExpBur :eeeeee: |