Protein Model on 7r5k_KB_6_U_7 (TEMPLATE: 7r5k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(NUP98_HUMAN) KB 6 (M0) polymer(polypeptide(L)) [673 aa] Nuclear pore complex protein Nup96 :NUP98_HUMAN
2 b U 7 (A5) polymer(polypeptide(L)) [726 aa] Nuclear pore complex protein Nup93 :NUP93_HUMAN 1377M 1435L 1436L 1437P 1440A 1443S 1444R 1447S 1448M 1498L 1499Y 1500S 1501D 1502R 1503H 1504Y 1536N 1537Y 1538T 1539H 1541S (identity: 100.0 %/95.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7r5k_KB_6 identity=95.3%
queryA      1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211
                :*************************************************                                 ******************:
7r5k_KB_6    232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331
SecStr          :        GGG TTTT TT TT HHHHTTT    EEETTTEEE  SS  ---------------------------------    EEE  SSS  HHHH:    
ExpBur          :eeeeeeeeeeebebeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeeeeeebeeeeeeeb:    

queryA      1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311
                :****************************************************************************************************:
7r5k_KB_6    332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431
SecStr          :THHHHHHHHHHTTSEEEE SSSS EEEE SSSHHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHHS  SSSTT SS   HHHHHHHHHHHHHHHHH:    
ExpBur          :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbbbbbbbbbbbbbbeebeeeeeeeeeeeeebbbbebbbebbb:    

queryA      1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411
                :****************************************************************************************************:
7r5k_KB_6    432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531
SecStr          :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T:    
ExpBur          :ebbbeebeeebeeeeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe:    
Contact         :                                                                 b                                  

queryA      1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511
                :****************************************************************************************************:
7r5k_KB_6    532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631
SecStr          :TS EEETTTT  HHHHHHHHHHTSS TTS HHHHHHHHHHHHS  SS        S GGGTTS       SS  S    HHHHHHHHHH TTS SHHHHS:    
ExpBur          :eeeebebbeebbbbbbbbbbbbbbbeeebebeebbebbbebbeeeeeeeebbbeebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe:    
Contact         :                       bbb  b  bb  bb                                                 bbbbbbb       

queryA      1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611
                :****************************************************************************************************:
7r5k_KB_6    632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731
SecStr          :GGGT S TT  HHHHHHHHHHTTTT   S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH  SS  HHHHHHHHHHHHTS  :    
ExpBur          :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbbebbbbbbbbbbbbeeeeebbeebeebbeebbebeeeeebeebbbbbeeebeb:    
Contact         :                        bbbb b                                                                      

queryA      1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711
                :****************************************************************************************************:
7r5k_KB_6    732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831
SecStr          : THHHHHHHHHHHHHT  HHHHHHHHHTTS THHHHHHHHHHTHHHHHHTT HHHHHHHHHHH STTTGGGSTT TTTHHHHHHHHHHHHHHHHHTTS  :    
ExpBur          :eeebbbebbbeebeeeeeeeeebebeeeeeebbeebeebbeeebbebbeeeebeebeeebeebeeeeebeebeebeebbbbbbbbbebbebbeebeeeee:    

queryA      1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811
                :****************************************************************************************************:
7r5k_KB_6    832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931
SecStr          : HHHHHHHHHHHHHHHHHHTT    STTHHHHHHHHHHHHHHHHHHHHHHHS   TT      TTSS HHHHHHHHTT    HHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeebeeebeebbebbeebebeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeeeeeebeeebeebeeeb:    

queryA      1812:LAVGSL:1817
                :******:
7r5k_KB_6    932:LAVGSL: 937
SecStr          :HHTT  :    
ExpBur          :eeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123