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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | KB 2 (M0) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | HB 2 (L1) | polymer(polypeptide(L)) [782 aa] | Nuclear pore complex protein Nup107 :NU107_HUMAN | 1682L (identity: 100.0 %/95.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7r5k_KB_2 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211 :************************************************* ******************: 7r5k_KB_2 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331 SecStr : GGG TTTT TT TT HHHHTTT EEETTTEEE SS --------------------------------- EEE SSS HHHH: ExpBur :eeeeeeeeeeebebeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeeeeeebeeeeeeeb: queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311 :****************************************************************************************************: 7r5k_KB_2 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431 SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSHHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHHS SSSTT SS HHHHHHHHHHHHHHHHH: ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeeeeeeeebeebbebbbbbbbbbbbbbbbbeebeeeeeeeeeeeeebbbbebbbebbb: queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411 :****************************************************************************************************: 7r5k_KB_2 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531 SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHHT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T: ExpBur :ebbbeebeeebeeeeeebebebbbbbbbbebbeebbebbeeeebeebbebbeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe: queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511 :****************************************************************************************************: 7r5k_KB_2 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631 SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHHHHS SS S GGGTTS SS S HHHHHHHHHH TTS SHHHHS: ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeebebeebbebbbebbeeeeeeeebbbeebbeeeeeeeeeeeeeeeeeeeebbbbbbbbbbeeeeebebeebbe: queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611 :****************************************************************************************************: 7r5k_KB_2 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731 SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS : ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbbebbbbbbbbbbbbeeeeebbeebeebbeebbebeeeeebeebbbbbeeebeb: queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711 :****************************************************************************************************: 7r5k_KB_2 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831 SecStr : THHHHHHHHHHHHHT HHHHHHHHHTTS THHHHHHHHHHTHHHHHHTT HHHHHHHHHHH STTTGGGSTT TTTHHHHHHHHHHHHHHHHHTTS : ExpBur :eeebbbebbbeebeeeeeeeeebebeeeeeebbeebeebbeeebbebbeeeebeebeeebeebeeeeebeebeebeebbbbbbbbbebbebbeebeeeee: Contact : b queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811 :****************************************************************************************************: 7r5k_KB_2 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931 SecStr : HHHHHHHHHHHHHHHHHHTT STTHHHHHHHHHHHHHHHHHHHHHHHS TT TTSS HHHHHHHHTT HHHHHHHHHHHHHHHHHH: ExpBur :eeeebeebeeebeebbebbeebebeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeeeeeebeeebeebeeeb: queryA 1812:LAVGSL:1817 :******: 7r5k_KB_2 932:LAVGSL: 937 SecStr :HHTT : ExpBur :eeeeee: |