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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | H 1 (H) | polymer(polypeptide(L)) [146 aa] | Nucleoporin NUP116/NSP116 :NU116_YEAST | |
2 | b | G 1 (G) | polymer(polypeptide(L)) [438 aa] | Nucleoporin NUP82 :NUP82_YEAST | 797K 798E(T) 799V(C) 800V(I) 801V(I) 806N(P) 821V(I) 826V(C) 830D 831K 832T(S) 833S(T) 834R 843L(Q) 844A(L) 850G(R) 854A(R) 855V(L) 875F (identity: 26.3 %/30.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3pbp_H_1 identity=30.4% |
queryA 741:YYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDD----IVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCL: 836 :** ** * * * * * ** * * * * * * * * * *** * * * * ** * : 3pbp_H_1 5:YYISPSLDTLSSYSLLQLR-KVPHLVVGHKSYGKIEFLEPVDLAGIPLTSLGGVIITFEPKTCIIYANLPNRPKRGEGINVRARITCFNCYPVDKSTRKP: 103 SecStr :EEEES HHHHHHS SSTTS-SB S EEEETTTEEEEESS B TTS TTHHHHTSEEEETTEEEES SS TTSTT S EEEEES B TTT B: ExpBur :bebebeeeebeeeeeeebe-ebeebbbbbeeebebebeeebebeebebebbbeebbbbeeeebebbeeeeeebeeeebbbbebebbbeebbbeeeeeeee: Contact : bbbbb b b b bbbbb queryA 837:IKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSH: 879 :** * * * * * ** * *: 3pbp_H_1 104:IKDPNHQL---VKRHIERLKKNPNSKFESYDADSGTYVFIVNH: 143 SecStr : TTSHH---HHHHHHHHHS SSSEEEEE TTT EEEEES : ExpBur :beeeeeee---beebeeebeeeeeeeeeebeeeebbbbbbbee: Contact : bb b bb b |