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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | GA 1 (W) | polymer(polypeptide(L)) [417 aa] | NUCLEAR PORE COMPLEX PROTEIN NUP96 :NUP98_HUMAN | |
2 | b | FA 1 (V) | polymer(polypeptide(L)) [660 aa] | NUCLEAR PORE COMPLEX PROTEIN NUP107 :NU107_HUMAN | 1293P 1354G 1355D 1360L 1363S 1369Q 1390F (identity: 100.0 %/87.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5a9q_GA_1 identity=87.8% |
queryA 1157:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEA:1256 :********************************* **************** ******************************* ********** : 5a9q_GA_1 277:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLXESPFKVHLEKLSLRQRXXXEDMKLYQTPLELKLKHSTVHVDELCPLIVPNXXVAVIHDYADWXXXX: 376 SecStr : HHHHHHHHHHHHT EEE SSS EEE - SSS EEE --- HHHHSHHHHHHHHHH B SSS B -- HHHHHH ----: ExpBur :eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebe-eeeeeeeeeeeeeeee---eebeeeeeeeeeeeeeeeeeeeeeeebeeee--eeeeeeeeee----: queryA 1257:SGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDH:1356 : ************************************************************** ******************************: 5a9q_GA_1 377:XXXXXXAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLXXKNSPVEAVFSYLTGKRISEACSLAQQSGDH: 476 SecStr :------ SSSHHHHHHHHHHHHHS S SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH -- SSHHHHHHHHHTT HHHHHHHHHHHT H: ExpBur :------eeeebeebeebeeebeeeeeeeeeeeeeeeebeeebeeebbeeeeeeeeeeeeeebeeeeee--eeeeeeebbebeeeebeeebbeebeeeeee: Contact : b bb queryA 1357:RLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNT:1456 :******************************* ****************** ***** ***************************************** : 5a9q_GA_1 477:RLALLLSQFVGSQSVRELLTMQLVDWHQLQAXXFIQDERLRIFALLAGKPVXQLSEKXQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNX: 576 SecStr :HHHHHHHTTT STHHHHHHHHHHHHTTS -- HHHHHHHHHHHS - S - THHHHS HHHHHHHHHHHS TTTS HHHHHHHHHHHS -: ExpBur :eebeebeeeeeeeeebeebeeebeebeeeee--eeeebeebebbeebbbee-eeeee-eeeeeeeeeeebeebebeebeeeeeeeeeeeeeebeeeeee-: Contact : b b b b queryA 1457:SDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL:1556 : ***************** ****************************************************: 5a9q_GA_1 577:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHXDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL: 676 SecStr :------------------------------ S HHHHHHHHHHT - HHHHHHHHHTT S HHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHH: ExpBur :------------------------------eeeeeebeeeeeebbee-ebeeeeeeeeeeeeeeeeeeebeebebbeeeeeeeeeeeebeebbeebbebb: queryA 1557:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKH:1631 :**************************************** *******************************: 5a9q_GA_1 677:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPXXXXKETFLTQKLRVPAKWIHEAKAVRAHMESDKH: 751 SecStr :HHHT HHHHHHHHHT S HHHHHHHHHHHHHHHHHHHH ---- HHHHHHHTT HHHHHHHHHHHHHHHT : ExpBur :eeeeebebbeeebbebeeeeebeeeeeeeeeebbeeeeee----eebeeeeeebeeeebeeebeeeebeeeeeee: |