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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(6lk8_G auth_asym_id:G) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
1039 | S | 155 | 155 | K | G | b | 16.0 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(NUP98_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [618 aa] | Nuclear pore complex protein Nup96 :A0A1L8HBE3_XENLA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6lk8_G_1 identity=52.2% |
queryA 1021:DTSQEICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSVSVQECRTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPR:1120 :* **** ** * * ******* * * ** * **** ** * * ******* *** : 6lk8_G_1 138:DPYPDVRSPRL-FPSSHAKRTSSM--GLLQSKFASPSISRXXXXAQGSHSPR------ILPVTPWSVPAPLAPTFVIXXXXXXXHLRTVGTRRQQELVPL: 228 SecStr :TTTT TT H-HHHHHHGGGS -- HHHHHHHHHHHH ---- HHHHHHH------HHHHHHH STTTHHHHH ------- HHHHHHHHHHHHHHH: ExpBur :eeeeeeeeebe-eeeeeebeeeee--eeeeeeeeeeeeee----eeeeeeeb------eeeeeeeeeeeebeeebee-------eeeeeebeeeeeeeee: queryA 1121:EKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLE:1220 :***** * * ** ** ***************** * * * * * **** * * *** *** ***** * * ***: 6lk8_G_1 229:EKSVTHGRGSLLIDMGLFMGRSFRVGWGPNWTLVHNGDKLXXRLNAEEDQNMDTIDYGFLPKPTSAKSXTESXXKVHMEKLSLEQK--SRELQSYLMPLE: 326 SecStr :HHHHHHHHHHHH SS HHHHHHHHHHHHH -- HHHHTTS SS SSS - -- S SS --HHHHH SHHHH: ExpBur :eeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee--eeeeeeeeeeeeeeeeeeeeeeeeee-eee--eeeeeeeeeeee--eeeeeeeeeeee: queryA 1221:LKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIE:1319 : ** * * ** ** *** ***** ** * * ** * ******* *** ** ** ** **** *** ** ** **: 6lk8_G_1 327:IELKNSSVDRSAQCPHFKPNAGVAAIHDYAGWVRNLSNEAGELEAVVKQWGLTWTLCESLWGQLKXXXXXXXEPNEYVRNLERRKAFSHWLAHTAEERIE: 426 SecStr :HHHHHH SS SHHHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHHHHHHT ------- HHHHHHHHHHHHHHHHHHHHHTHHHHH: ExpBur :eeeeeeeeeeeeeebeeeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeebeeeeeebeeeee-------eeeeeeebeebbeeeeebbeeebbeeee: queryA 1320:EEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVC:1419 :***** ****** *** ** ** *** **** ***** **** *** ***** ** **** * ** * *** * ****: 6lk8_G_1 427:EEVSLYGPERHVEAVFSFLTGXXISDACRLAQXXXDHRLSLLLSQMVGSQEMRELISLQLVDWNKLQXXXXXXXERLRVFCLLSGTPVWRSSDNRSINVC: 526 SecStr :HHHHHHTTT SSHHHHHHH -- HHHHHHH --- HHHHHHHTTTT STHHHHHHHHHHHHHHH ------- HHHHHHHTS TTT TTT STTGGG: ExpBur :eeeeebeeeeeeeeeeebeee--eeeeeeeee---eeeeeeeeeeeeeeeeebeeebeeeeeeeeee-------eeebebbeeebeeeebeeeebeeeee: queryA 1420:SQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPL--RDVCFHLLKLYSDRHYDLNQLLEPRSITA:1517 :******* ** **** ***** * ** ** *** **** ******* * *** *** * * * : 6lk8_G_1 527:SQLDWKRTLAVHLWYMLPPTATIAQALRLYERAFQEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDVCVHLLKLYSERQYDLCQLLDPSSVTP: 626 SecStr :GTS HHHHHHHHHHHS SSTTHHHHHHHHHHHH --------------------------------- HHHHHHHHHT S SSSHHHHHHTT: ExpBur :eeeeeebebbebbebbeeeeebbeeebbebeeeeeee---------------------------------eeeeeeebeeeeeeeeeeeeeeeeeeeeee: queryA 1518:DPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIH:1617 :* ******** ** ******** * * **** *** ************* *** ***** * * * *** *** ** * *** * *: 6lk8_G_1 627:DXXXYRLSWHLWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVLLHIPHPHIREAGVRELLNRQCVVRESPESLAKENFLIHRLCVPAQWVH: 726 SecStr : --- HHHHHHHHHHHHHSSS SHHHHHHHHHHHHHHTTS HHHHHHHHHHS SSSHHHHHHHHHHHHTSSTHHHHSTTTHHHHHHHHS S HH: ExpBur :e---ebeebeebeebbeeeeeeeeeeeeeeebeebeeeebeeebeeeeeeeeeeeeeeeebeeebeeeeeeebeeebeeeeeeeebeeeeeeeeeeeeeb: queryA 1618:EAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLE:1717 :**** * * * ** **** ** ** * ** ** ******* ** * * **: 6lk8_G_1 727:EAKAIRSRRDXXXXXXXXYLLKGHQXXXXXKLVTRHLAADAXXXXXXXXXXSFLGELSNPEHCKHIQXXXXXXXXXLDYIRVIDMLNLIXXXXXXGCELE: 826 SecStr :HHHHHHHHH -------- HHHHH ----- HHHHHHHHT ---------- HHHHHHHHHHHHHH --------- HHHHHHHHHHH ------ HHHH: ExpBur :eeeebbeeee--------eebbeee-----eeeeeeeeeee----------eeeeeeebeebeeeee---------eebeeebeeeeee------eeeeb: queryA 1718:QLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLL:1755 : ** ** *** * ******** ******* *: 6lk8_G_1 827:KLHTKVMSLCXXXXXXXXYTAKDRLAQSEMAKRVANIL: 864 SecStr :HHHHHHHHH -------- HHHHHHHHHHHHHHHHHH : ExpBur :eebbeebeee--------eeeeebeeebeeebeeeeee: |