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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [420 aa] | Nucleoporin NUP145 :NU145_YEAST | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [423 aa] | Nucleoporin NUP145 :NU145_YEAST | 1301E 1305A(R) 1308R(S) 1311S(V) 1341K(N) 1342R(D) 1343I(V) 1344S(V) 1351Q(I) 1356H(G) 1357R(H) 1360L(V) 1363S 1365F(Y) 1368S 1374L 1378Q 1381D(K) 1382W 1395R(I) 1399F(Y) (identity: 28.6 %/26.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3bg1_G_1 identity=26.4% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 3bg1_G_1 153:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 247 SecStr :HHHHHHHHHHHHHSHHHHHHHHH--T S HHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHH-HHTS HHHHHHHHHHHHHTTS--S S HHHHHH: ExpBur :ebbeebbebbeeebbeebeeebe--eeeeebebbbbebbbebeeebeebbeebeeeebbebbe-ebeeeeeebeeebeeebeeeee--eeeeeeebbbbb: Contact :b b b b bbbb b bb b b b b b b b bb b queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 3bg1_G_1 248:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 324 SecStr :HHHHHS STTSTT SGGGG--GTS HHHHHHHHHHT SSS HHHHHHHHHHHS TT ------HHHHHHH----HHHS TTHH-----------HH: ExpBur :bbbbbbebbeeeeebeebe--eebeebbbbbbbbebbbeeeeebeebbeebbeebebeeee------ebbbbbe----bbbbeeebb-----------eb: Contact :b queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 3bg1_G_1 325:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 410 SecStr :HH----------HHHTT -S S HHHHHHHHHHHHTTSSS HHHHHHHHHHHHHHHHHTT HHHHHHHHHT S HHHHHHHHHHHHHHSTGGGST---: ExpBur :be----------ebeeeb-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbebeebbbbbbbbbbbbeeeebeebbeebbebbbeebee---: queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * * * * * *: 3bg1_G_1 411:-STNDHILNRLKIPSQLIFNAQALKDRYE: 438 SecStr :-TTTS HHHHTT HHHHHHHHHHHHHHH: ExpBur :-eeeeebbeebebbeebbeebbeeeeeee: |