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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(NUP98_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [638 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vop_F_1 identity=62.8% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230 :* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** : 7vop_F_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336 SecStr : S S S S EEETTTEEEEES TTT SS SS SSSS GGGT SSS EEEEE S S--SHHHHHHHHHHHHHHHS : ExpBur :eeeeeeeeeeeeeeeeeeeeebeebbeebeeeeeeeebeebbeeeeeeeeeeeeeeeeeeeeeeeebebeeeeeeee--eeeebbeebbeebbeebebee: queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329 : ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* : 7vop_F_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436 SecStr : SSS GGGHHHHHHHHHHHHHH S HHHHHHHHHHHHHHHHTS S S SSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SS : ExpBur :eeebbbbeeeebeebbeebbebbeeebeebeeeebbbebbbbbbebbbbbebebeeeeeeeeeeeeeeeeeebbeebbebbeebbeeebeeeeeebbeee: queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429 : ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * : 7vop_F_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536 SecStr :SHHHHHHHHHH SSHHHHHHHHHHS SHHHHHHHS TT SHHHHHHHHHHHHHHTT S TTTS STTS SS SSSSSS HHHHHH: ExpBur :eeebebbbbbbbeeebbeebbeeeeeeeebeebbeeeebeeebeeebeebeeebeeeeeeeeeeeeebeebbbbbbebebeeeebebbbbbebbbbbbeb: queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527 :***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********: 7vop_F_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636 SecStr :HHHHHTS TTS HHHHHHHHHHHHSGGGSS S SSSS SS SS HHHHTTT SHHHHHHHHH S S SS S S SSSSS SHHHH: ExpBur :bbebbbeeeeeebeebbeebeebbbeebeeebbbbbbbbbbeeeeeeeebebeeebeeebebbebbbbbbbeeeeeeebeeeebebbbbeeeebbbbbbb: queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** : 7vop_F_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736 SecStr :HHHHHHHTT S S HHHHHHHHHHHHHHHHHHT SHHHHHHHTTS SHHHHHHHHHHHHHHS SS HHHHHHHHHHHHTS HHHHHHHHHHHHHHH: ExpBur :eebbbebeeebeeeeeebeebbeebbebbeeeeeebbbbbbbbbeeeeeebeeebeeebeebbeeeeeeebeeebeebeeebebbeebbeebbbeebeee: queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727 : *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***: 7vop_F_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836 SecStr : HHHHHHHHHHH SHHHHHHHHHHHHHHHHHHT HHHHHHHHHHH HHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHT: ExpBur :eeeeeebebebebeeeeebbeebeeebbbbbeeeeeeeebeebbeebeeeebbeebeebeebbebebbebebeebeeebeeeeeeeeeeeebeeebeebe: queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPD:1766 : * ******* ***** ******* ******* ** : 7vop_F_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPPE: 875 SecStr :TTTTTS SHHHHHHHHHHHHHHHHHHHHHHHHHS : ExpBur :eeeeebeeeeeebeeebeebeeebeebeeebeeeeeeee: |