[pdbjlvh2]Protein Model on 3bg0_F

Protein Model on 3bg0_F_1 (TEMPLATE: 3bg0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:3] [assembly_id:6]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(NUP98_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [423 aa]	Nucleoporin NUP145 :NU145_YEAST

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bg0_F_1 identity=26.4%

queryA      1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
                :**      *      * ***           *  * **       *  **  *    *  * *   **     * *   **  *        *      *:
3bg0_F_1     153:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 247
SecStr          :HHHHHHHHHHTTTSHHHHHTTTT--T S HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHH-HTTS  HHHHHHHHHHHHHTTS--S     HHHHHH:    
ExpBur          :ebbeebbebbeeebbeebeeebe--eeeeebeebbbebbbebeeebbeebeebeeeebbebbe-ebeeeeeebeeebeeebeeeee--eeeeeeebbbbb:    

queryA      1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
                :  ** * *   *   *     *   *   *   * *      *           *    *       *            *   *             **:
3bg0_F_1     248:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 324
SecStr          :HHHHHS SSSSTT SGGGG--GTS HHHHHHHHHHT   SS  HHHHHHHHHHH    TT ------HHHHHHH----HHHS TTHH-----------HH:    
ExpBur          :bbbbbbbbbeeeeebeebe--eebebbbbbbbbbbbbbbeeeebeebbebbbeebeeeeee------bbbbbbe----bbbbeeebb-----------eb:    

queryA      1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
                :*           * *  *   **    * *   **       *           * ***   *     **          *     *  *   **     :
3bg0_F_1     325:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 410
SecStr          :HH----------HHTTS -SSS HHHHHHHHHHHHTTT S   HHHHHHHHHHHHHHHHHTT TTHHHHHHTT S HHHHHHHHHHHHHHHTGGGST---:    
ExpBur          :be----------ebeeeb-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbebeebbbbbbbbbbbbeeeebeebbeebbeebbeebee---:    

queryA      1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
                :          *  *   *  * *     *:
3bg0_F_1     411:-STNDHILNRLKIPSQLIFNAQALKDRYE: 438
SecStr          :-TTTS HHHHTT  HHHHHHHHHHHHHHH:    
ExpBur          :-eeeeebbeebebbeebbeebbeeeeeee:

Protein Model on 3bg0_F_1 (TEMPLATE: 3bg0 )

Input Residue Numbers for Focused Sites