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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [638 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
2 | b | Y 1 (Y) | polymer(polypeptide(L)) [761 aa] | Nup358 :A0A1L8HGL2_XENLA | 1393D(E) 1415Q(S) 1420S 1421Q 1455N(E) 1460D(E) 1461R(P) 1462Y 1470Y 1471L 1472E 1473G(D) 1474S(C) 1475G 1476C(F) 1477V(S) 1478I(F) 1479A(G) 1480E(D) 1486T(S) 1487P(L) 1517A(P) 1518D 1519P (identity: 37.5 %/62.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vop_F_1 identity=62.8% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230 :* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** : 7vop_F_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336 SecStr : S S S S EEETTTEEEEES TTT SS SS SSSS GGGT SSS EEEEE S S--SHHHHHHHHHHHHHHHS : ExpBur :eeeeeeeeeeeeeeeeeeeeebeebbeebeeeeeeeebeebbeeeeeeeeeeeeeeeeeeeeeeeebebeeeeeeee--eeeebbeebbeebbeebebee: queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329 : ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* : 7vop_F_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436 SecStr : SSS GGGHHHHHHHHHHHHHH S HHHHHHHHHHHHHHHHTS S S SSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SS : ExpBur :eeebbbbeeeebeebbeebbebbeeebeebeeeebbbebbbbbbebbbbbebebeeeeeeeeeeeeeeeeeebbeebbebbeebbeeebeeeeeebbeee: queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429 : ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * : 7vop_F_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536 SecStr :SHHHHHHHHHH SSHHHHHHHHHHS SHHHHHHHS TT SHHHHHHHHHHHHHHTT S TTTS STTS SS SSSSSS HHHHHH: ExpBur :eeebebbbbbbbeeebbeebbeeeeeeeebeebbeeeebeeebeeebeebeeebeeeeeeeeeeeeebeebbbbbbebebeeeebebbbbbebbbbbbeb: Contact : b b bb queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527 :***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********: 7vop_F_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636 SecStr :HHHHHTS TTS HHHHHHHHHHHHSGGGSS S SSSS SS SS HHHHTTT SHHHHHHHHH S S SS S S SSSSS SHHHH: ExpBur :bbebbbeeeeeebeebbeebeebbbeebeeebbbbbbbbbbeeeeeeeebebeeebeeebebbebbbbbbbeeeeeeebeeeebebbbbeeeebbbbbbb: Contact : b bbb bbbbbbbbbbb bb bbb queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** : 7vop_F_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736 SecStr :HHHHHHHTT S S HHHHHHHHHHHHHHHHHHT SHHHHHHHTTS SHHHHHHHHHHHHHHS SS HHHHHHHHHHHHTS HHHHHHHHHHHHHHH: ExpBur :eebbbebeeebeeeeeebeebbeebbebbeeeeeebbbbbbbbbeeeeeebeeebeeebeebbeeeeeeebeeebeebeeebebbeebbeebbbeebeee: queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727 : *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***: 7vop_F_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836 SecStr : HHHHHHHHHHH SHHHHHHHHHHHHHHHHHHT HHHHHHHHHHH HHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHT: ExpBur :eeeeeebebebebeeeeebbeebeeebbbbbeeeeeeeebeebbeebeeeebbeebeebeebbebebbebebeebeeebeeeeeeeeeeeebeeebeebe: queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPD:1766 : * ******* ***** ******* ******* ** : 7vop_F_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPPE: 875 SecStr :TTTTTS SHHHHHHHHHHHHHHHHHHHHHHHHHS : ExpBur :eeeeebeeeeeebeeebeebeeebeebeeebeeeeeeee: |