Protein Model on 7n84_F_8_G_8
(TEMPLATE: 
7n84
)Protein Model on 7n84_F_8_G_8
(TEMPLATE: 7n84
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | F 8 (c) | polymer(polypeptide(L)) [559 aa] | Nucleoporin 145c :NU145_YEAST | |
| 2 | b | G 8 (d) | polymer(polypeptide(L)) [274 aa] | Protein transport protein SEC13 :SEC13_YEAST | 1500S(K) 1513R 1514S(Q) 1547V(E) 1550A(F) 1554G(A) 1558S(F) 1572I(L) 1577I(A) 1580K(D) 1581A(T) 1583R(K) 1584E(R) 1587T(M) 1589H(E) 1622V(L) 1623R(K) 1625H(R) 1626M(Y) 1627E (identity: 10.0 %/24.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7n84_F_8 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
:** * * *** * * ** * ** * * * * ** * * ** * * *:
7n84_F_8 264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358
SecStr :HHHHHHHHHHHHTTHHHHHHHHT--T HHHHHHHHHHH HHHHTTTTTTTT SSSSS - SS SHHHHHHHHHHHHH S--S S TTHHHH:
ExpBur :bbbeebbebbeeebbeebeebbe--ebeeebbbbbbbbbbeeeeebeeebeeeeeeebbebbe-beeeebeebbeebeeebeebee--eeeeeeebbbbb:
queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
: ** * * * * * * * * * * * * * * * **:
7n84_F_8 359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435
SecStr :HHHTTT SS SSS SSS S--SSS HHHHHHHHHHHS TTTS SHHHHHHHHHH SSS------TTTTTTH----HHH STTHH-----------HH:
ExpBur :bbbbbbebbeeebebeebe--eebbebbbbbbbbbbbbbeeeebeebbeebbebbebeeee------bbbbbbb----bbbbeeebe-----------eb:
queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
:* * * * ** * * ** * * *** * ** * * * ** :
7n84_F_8 436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521
SecStr :HH----------HHTTS - SS HHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHTT HHHHHHHTTT TTHHHHHHHHHHHH GGGSSS---:
ExpBur :be----------ebeeee-ebbebbbbbbbbbbbbbeeebebeeebbeebbeebbebbbbbeebbbbbbbbbbbeeeebbeeebeebbeebbeebee---:
Contact : b bb b b b b b b bb bb b b
queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692
: * * * * * * * * * * * * * ** * * *:
7n84_F_8 522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616
SecStr :-SSSTTTSTTSS HHHHHHHHHHS SSSHHHHHHHHHTT S SS TTTSHHHHSS STTHHHHHHHHTTHHHHS SS ---- SSSSTH:
ExpBur :-eebbeebbebebeeebbeebbbebeeeeeeebebbebbbebeebeebbeebbbbbbeeeeeeeeeebbeebeebbebbeebeeeeeeb----ebebbeb:
Contact : bb bbb b
queryA 1693:YLDYIRVI:1700
: * :
7n84_F_8 617:FEVYLKLV: 624
SecStr :HHHGGGSS:
ExpBur :bbebbebe:
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[assembly_id:1]
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