Protein Model on 5a9q_F_4_G_4 (TEMPLATE: 5a9q )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(NUP98_HUMAN) F 4 (5) polymer(polypeptide(L)) [417 aa] NUCLEAR PORE COMPLEX PROTEIN NUP96 :NUP98_HUMAN
2 b G 4 (6) polymer(polypeptide(L)) [285 aa] PROTEIN SEC13 HOMOLOG :SEC13_HUMAN 1174S 1175M 1176E 1177F 1178G 1195K 1554G 1625H (identity: 100.0 %/87.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5a9q_F_4 identity=87.8%
queryA      1157:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEA:1256
                :********************************* ****************   *******************************  **********    :
5a9q_F_4     277:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLXESPFKVHLEKLSLRQRXXXEDMKLYQTPLELKLKHSTVHVDELCPLIVPNXXVAVIHDYADWXXXX: 376
SecStr          : HHHHHHHHHHHHT     EEE SSS EEE   -  SSS EEE       --- HHHHSHHHHHHHHHH  B   SSS  B   --   HHHHHH ----:    
ExpBur          :eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebe-eeeeeeeeeeeeeeee---eebeeeeeeeeeeeeeeeeeebeeeebeeee--eeeeeeeeee----:    
Contact         :                 bbbbb                b                                                             

queryA      1257:SGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDH:1356
                :      **************************************************************  ******************************:
5a9q_F_4     377:XXXXXXAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLXXKNSPVEAVFSYLTGKRISEACSLAQQSGDH: 476
SecStr          :------  SSSHHHHHHHHHHHHHS     S   SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH --  SSHHHHHHHHHHT HHHHHHHHHHHT H:    
ExpBur          :------eeeebeebeebeeebeeeeeeeeeeeeeeeebeeebeeebbeeeeeebeeeeeeebeeeeee--eeeeeeebbebeeeebeeebbeebeeeeee:    

queryA      1357:RLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNT:1456
                :*******************************  ****************** ***** ***************************************** :
5a9q_F_4     477:RLALLLSQFVGSQSVRELLTMQLVDWHQLQAXXFIQDERLRIFALLAGKPVXQLSEKXQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNX: 576
SecStr          :HHHHHHHTTT  STHHHHHHHHHHHHTTS  --   HHHHHHHHHHHS   -  S  -  THHHHS HHHHHHHHHHHS TTTS HHHHHHHHHHHS  -:    
ExpBur          :eebeebeeeeeeeeebeebeeebeebeeeee--eeeebeeeebbeebebee-eeeee-eeeeeeeeeeebeebebeebbeeeeeeeeeeeeebeeeeee-:    

queryA      1457:SDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL:1556
                :                              ***************** ****************************************************:
5a9q_F_4     577:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHXDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL: 676
SecStr          :------------------------------  S HHHHHHHHHHT  - HHHHHHHHHTT   S HHHHHHHHHHHHHHTSS   HHHHHHHHHHHHHHH:    
ExpBur          :------------------------------eeeeeebbeeeeebbee-ebeeeeeeeeeeeeeeeeeeebeebebbeeeeeeeeeeeebeebbeebbebb:    
Contact         :                                                                                                 b  

queryA      1557:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKH:1631
                :****************************************    *******************************:
5a9q_F_4     677:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPXXXXKETFLTQKLRVPAKWIHEAKAVRAHMESDKH: 751
SecStr          :HHHT HHHHHHHHHT S HHHHHHHHHHHHHHHHHHHH  ---- HHHHHHHTT  HHHHHHHHHHHHHHHT   :    
ExpBur          :eeeeebebbeeebeebeeeeebeeeeeeeeeebbeeeeee----eebeeeeeebeeeebeeebeeeebeeeeeee:    
Contact         :                                                                    b

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