Protein Model on 7vci_F_1_G_1
(TEMPLATE: 
7vci
)Protein Model on 7vci_F_1_G_1
(TEMPLATE: 7vci
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [687 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
| 2 | b | G 1 (G) | polymer(polypeptide(L)) [294 aa] | GATOR complex protein SEC13 :Q7ZYJ8_XENLA | 1140G 1141R 1142S 1143F 1144R 1145V 1147W 1148G 1149P 1151W 1154A(V) 1156S(N) 1157G 1158E(D) 1162G(E) 1178G 1179F 1180L 1182N(K) 1183P 1184V(T) 1185A(S) 1186V(A) 1187K 1194F 1196V 1232E(G) 1233L(P) 1510L 1511E(D) 1543Q(H) 1548L 1573D(Q) 1574N(D) 1575S(P) 1576G(H) 1577I(V) 1579E 1588R 1622V 1623R 1625H(R) 1626M(R) (identity: 55.8 %/64.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7vci_F_1 identity=64.0% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230
:* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** :
7vci_F_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336
SecStr : SS EEEETTTEEEESS SGGGTSSS SS SSSS SSS SSS EEEE S S--STHHHHHHHHHHHHHHB B :
ExpBur :eeeeeeeeeeeeeeeeebeeebeebeeebebeeeeeeeeebbeeeeeeeeeeeeeeeeeeeeeebebbbeeeeeeee--eeeeebebbbebbeebbeeee:
Contact : bbbbbb bbb b b bbb b bbb bbbbbb b b
queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329
: ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* :
7vci_F_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436
SecStr : SSS B B SSHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHHHT STTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSS:
ExpBur :eeebbbbeeeeeeebbeebbeebeeeeeebeebeeebebbbbbbbbbbbbbbebeebeeeeeeeeeeeeeebbbebbeebbeebbeebeeebeeeeeeee:
Contact : bb
queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429
: ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * :
7vci_F_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536
SecStr :HHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHHHHHHHHHTGGGGS HHHHHHHHHHHT SEEE TT EEE S HHHHHH:
ExpBur :ebebbbbbbbeebeeebeeebeeeeeeeebeebeebeeeeebeeebeeebeeeeeeeebeeeeeeebbbebbbbeeebbebeeeeebebbeebbbbbbbb:
queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527
:***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********:
7vci_F_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636
SecStr :HHHHHTS TTS SHHHHHHHHHHHS SSSS S HHHHTT S HHHHHSS HHHHHHHHHH SS GGG GGGSSSSS HHHHH:
ExpBur :bbbbbeeeeeeebeebbeebeeebeeeeeeebebbbbbbbebeeeeebebeeeeebeeebeebbbbbbbebbeeeebebeebeebbbbbeeeebbbbbbb:
Contact : bb
queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
: * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** :
7vci_F_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736
SecStr :HHHHHHHTT HHHHHHHHHHHHHHHHHHT HHHHHHHHTS HHHHHHHHHHHHHHH HHHHHHHHHHHHTS HHHHHHHHHHHHHHH:
ExpBur :bbbbbeeeeebeeeeeeeeeebeebbbbbeeeeebbbbbbbbbbeeeeeebeebbeebbeeebebeeeeeeeeeeeebeeebebeeebbbebbbeebeee:
Contact : b b bbbbb b b bb bb
queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727
: *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***:
7vci_F_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836
SecStr :T HHHHHHHHHHHT HHHHHHHHHHTHHHHHHHHT HHHHHHHHHHHTSHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH:
ExpBur :eeeebbbeebeeeeeeeebbeebeeebebebeeeeeeeebeebbebbbeeebbeebeebeeebebebebeebeeeeeebeeeeeeeeeeeebeeeeeeee:
queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGS:1816
: * ******* ***** ******* ******* ** *** * ********************* *** ********* **:
7vci_F_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPPESMSDSSSEP-RVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELICGS: 924
SecStr :HHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTS TTS SSSS - THHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHT :
ExpBur :eebbebeeeeeeeeebbeebeeeeeeeeeeeeeeeeeeeeeeeeeeee-eeebeeeeeeeeeeeeeeeebeeeeebeeeeeeebeeeee:
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[assembly_id:1]
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