Protein Model on 3bg1_F_1_G_1
(TEMPLATE: 
3bg1
)Protein Model on 3bg1_F_1_G_1
(TEMPLATE: 3bg1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [423 aa] | Nucleoporin NUP145 :NU145_YEAST | |
| 2 | b | G 1 (G) | polymer(polypeptide(L)) [420 aa] | Nucleoporin NUP145 :NU145_YEAST | 1301E 1305A(R) 1308R(S) 1341K(N) 1342R(D) 1343I(V) 1344S(V) 1348S(K) 1351Q(I) 1356H(G) 1357R(H) 1360L(V) 1363S 1365F(Y) 1368S 1374L 1378Q 1382W 1399F(Y) (identity: 31.6 %/26.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3bg1_F_1 identity=26.4% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
:** * * *** * * ** * ** * * * * ** * * ** * * *:
3bg1_F_1 153:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 247
SecStr :HHHHHHHHHHHHHSHHHHHHHHH--T S HHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHH-HHTS HHHHHHHHHHHHHTTS--S S HHHHHH:
ExpBur :ebbeebbebbeeebbeebeeebe--ebeeebeebbbebbbeeeeebeeebeebeeeebbebbe-ebeeeeeebeeebeeebeeeee--eeeeeeebbbbb:
Contact :b b b bbbb b b bb b b b b b b b
queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
: ** * * * * * * * * * * * * * * * **:
3bg1_F_1 248:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 324
SecStr :HHHHHS STTSTT SGGGG--GTS HHHHHHHHHHT SS HHHHHHHHHHHS TT ------HHHHHHH----HHHS TTHH-----------HH:
ExpBur :bbbbbbbbbeeeeebeebe--eebebbbbbbbbbbbbbbeeeebeebbebbbeebeeeeee------ebbbbbe----bbbbeeebb-----------eb:
Contact :b
queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
:* * * * ** * * ** * * *** * ** * * * ** :
3bg1_F_1 325:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 410
SecStr :HH----------HHHTT -S S HHHHHHHHHHHHTTS S HHHHHHHHHHHHHHHHHT HHHHHHHHTT HHHHHHHHHHHHHHSTGGGST---:
ExpBur :be----------ebeeee-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbeeebbbbbbbbbbbbbeeebbeeebeebbebbbeebee---:
queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
: * * * * * *:
3bg1_F_1 411:-STNDHILNRLKIPSQLIFNAQALKDRYE: 438
SecStr :-TTTS HHHHTT HHHHHHHHHHHHHHH:
ExpBur :-eeeeebbeebebbeebbeebbeeeeeee:
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[assembly_id:1]
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