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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | F 2 (5) | polymer(polypeptide(L)) [417 aa] | NUCLEAR PORE COMPLEX PROTEIN NUP96 :NUP98_HUMAN | |
2 | b | E 2 (4) | polymer(polypeptide(L)) [660 aa] | NUCLEAR PORE COMPLEX PROTEIN NUP107 :NU107_HUMAN | 1293P 1354G 1355D 1360L 1363S 1369Q 1390F (identity: 100.0 %/87.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5a9q_F_2 identity=87.8% |
queryA 1157:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEA:1256 :********************************* **************** ******************************* ********** : 5a9q_F_2 277:GEQLNGSHELENHQIADSMEFGFLPNPVAVKPLXESPFKVHLEKLSLRQRXXXEDMKLYQTPLELKLKHSTVHVDELCPLIVPNXXVAVIHDYADWXXXX: 376 SecStr : HHHHHHHHHHHHT EEE SSS EEE - SSS EEE --- HHHHSHHHHHHHHHH B SSS B -- HHHHHH ----: ExpBur :eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebe-eeeeeeeeeeeeeeee---eebeeeeeeeeeeeeeeeeeebeeeebeeee--eeeeeeeeee----: queryA 1257:SGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDH:1356 : ************************************************************** ******************************: 5a9q_F_2 377:XXXXXXAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLXXKNSPVEAVFSYLTGKRISEACSLAQQSGDH: 476 SecStr :------ SSSHHHHHHHHHHHHHS S SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH -- SSHHHHHHHHHHT HHHHHHHHHHHT H: ExpBur :------eeeebeebeebeeebeeeeeeeeeeeeeeeebeeebeeebbeeeeeebeeeeeeebeeeeee--eeeeeeebbebeeeebeeebbeebeeeeee: Contact : b bb queryA 1357:RLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNT:1456 :******************************* ****************** ***** ***************************************** : 5a9q_F_2 477:RLALLLSQFVGSQSVRELLTMQLVDWHQLQAXXFIQDERLRIFALLAGKPVXQLSEKXQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNX: 576 SecStr :HHHHHHHTTT STHHHHHHHHHHHHTTS -- HHHHHHHHHHHS - S - THHHHS HHHHHHHHHHHS TTTS HHHHHHHHHHHS -: ExpBur :eebeebeeeeeeeeebeebeeebeebeeeee--eeeebeeeebbeebebee-eeeee-eeeeeeeeeeebeebebeebbeeeeeeeeeeeeebeeeeee-: Contact : b b b b queryA 1457:SDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL:1556 : ***************** ****************************************************: 5a9q_F_2 577:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHXDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQL: 676 SecStr :------------------------------ S HHHHHHHHHHT - HHHHHHHHHTT S HHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHH: ExpBur :------------------------------eeeeeebbeeeeebbee-ebeeeeeeeeeeeeeeeeeeebeebebbeeeeeeeeeeeebeebbeebbebb: queryA 1557:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKH:1631 :**************************************** *******************************: 5a9q_F_2 677:ESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPXXXXKETFLTQKLRVPAKWIHEAKAVRAHMESDKH: 751 SecStr :HHHT HHHHHHHHHT S HHHHHHHHHHHHHHHHHHHH ---- HHHHHHHTT HHHHHHHHHHHHHHHT : ExpBur :eeeeebebbeeebeebeeeeebeeeeeeeeeebbeeeeee----eebeeeeeebeeeebeeebeeeebeeeeeee: |