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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | DA 4 (DE) | polymer(polypeptide(L)) [543 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | CA 4 (DD) | polymer(polypeptide(L)) [678 aa] | Nuclear pore complex protein Nup107 :NU107_HUMAN | 1356H 1359A 1360L (identity: 100.0 %/92.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7peq_DA_4 identity=92.0% |
queryA 1213:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC:1312 :****************************************************************************************************: 7peq_DA_4 333:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC: 432 SecStr : SHHHHHHHHTTEEEEE SS EEEEEE STT SGGGSTT SSSSSTTTTSHHHHHHHHHHHHHSS SS S SS SHHHHHHHHHHHHHHHH: ExpBur :eeeeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebbeebeeeeeeeeeeeeebeeeeeebeeebeeeeeeeeeeeeeeeeeeeebeeebbeeeeeebbe: queryA 1313:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE:1412 :****************************************************************************************************: 7peq_DA_4 433:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE: 532 SecStr :HHHHHHTTHHHHHTTT TTHHHHHHGGGT HHHHHHHHHTTS SHHHHHGGG S STHHHHHHHHHHHHHSTTTTTT HHHHHHHHHTTT SSSS ST: ExpBur :eeeeeeeeeeeebeeeeeebebeebeeeebeeebbeebeeeeeeeebeeeeeeeeeeeebeebeeeeeebeeeeeeeeeeebeeeeebeeeebeeeeeee: Contact : b bb queryA 1413:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEP:1512 :******************************************* **************************: 7peq_DA_4 533:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHYDLNQLLEP: 632 SecStr :T GGGTTTS HHHHHHHHHSSS TTTS HHHHHHHHHHSS ------------------------------- SS HHHHHTTSSSGGGS HHHHHHH: ExpBur :beeeeeeeeeeeebeebebeebbeeeeeeeeeeebebeeeeee-------------------------------eeeeeebeeeeeebebeeebeeeeee: queryA 1513:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP:1612 :****************************************************************************************************: 7peq_DA_4 633:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP: 732 SecStr :HHTT S HHHHHHHHHHHHTTT S HHHHHHHHHHHHHHHHHHT SHHHHHHHHS S HHHHHHHHHHHHHH TTS TTT STTTTTGGGT : ExpBur :eeeeeeeeeebbebbebeebeeeeeeeeeeeeeeebbeebbeebeeeebbebbeebbeeeeeeeebeeeeeebbeeebeebbeeeebebeebebeeebee: queryA 1613:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS:1712 :****************************************************************************************************: 7peq_DA_4 733:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS: 832 SecStr : HHHHHHHHHHHHHS HHHHHHHHHTTT SS HHHHHHHHGGG TT HHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHH SS S : ExpBur :eeebbebbbebeeeeeebeebbeeebeeebbeeeeeebeebebeeeeeeeebeeeeeebeeeeeebeeeeeeeeeeeeebeeebbeeeeeeeeeeeeeee: queryA 1713:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR:1802 :****************************************** ********************************: 7peq_DA_4 833:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLXXXXXXXXXXXXXXXXSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR: 922 SecStr : SHHHHHHHHHHHHHTHHHHT HHHHHHHHHHH TTT----------------S TTTSTTTT HHHHHH : ExpBur :eeeeeebeebbeeeeebeeeeeeeeeeebeeeeeeebeeeee----------------eeeeeeeeeeeeebeeeeeeeeeeeeeeeeee: |