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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(NUP98_HUMAN) | CA 1 (g) | polymer(polypeptide(L)) [607 aa] | Nuclear pore complex protein Nup96 :A0A1L8HBE3_XENLA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6lk8_CA_1 identity=51.0% |
queryA 1025:EICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSVSVQECRTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPREKSV:1124 : **** ** * * ******* * * * * * **** ** * **** ******* *** ****: 6lk8_CA_1 142:DVRSPRL-FPSSHAKRTSSM--GLLQSKFASPSISRISXTAQGSHSP------XILPVTPWSVPAPLAPXXVIPRPAPEXXXRTVGTRRQQELVPLEKSV: 232 SecStr : HHHHH-HHH TT --HHHHHHHT HHHH - HHHHH ------- TTHHHHHTHHHH -- TTTTT --- HHHHHHHHHHHHHHHHH: ExpBur :eeeeeee-eeeeeeeeeeee--eeeeeeeeeeeeeeee-eeeeeeee-------eeeeeeeebeeebee--eeeeeeee---eeeeeeeeeeeeeeeeee: queryA 1125:TYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLK:1224 :* * * ** ** *** ********* * * * * * *** * ****** ** * *** **: 6lk8_CA_1 233:THGRGSLLIDMGLFMXXXXXVGWGPNWTLVHNGDKLTXXXNAEEDQNXDTIDYGFLXXXTSAKSXXXSPFKVHMEKXXXXXK--SRELQSYLMPLEIELK: 330 SecStr :HHHHHHHHHHHHHH ----- HHHHHHHHHHHHHH --- HHHHH - --- --- ----- --HHHHHHHHHHHHTTSS: ExpBur :eeeeeeeeeeeeeee-----eeeeeeeeeeeeebeee---eeeeeee-eeeebeee---eeeee---eeeeeeeee-----e--eeeeeeeeeeeeeeee: queryA 1225:HSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVS:1323 : * * ** ** *** ***** ** * * ** * ******* *** ** ** ** **** *** ** ** ******: 6lk8_CA_1 331:NSSVDRSAQCPHFKPNAGVAAIHDYAGWVRNLSNEAGELEAVVKQWGLTWTLCESLWGQLKXXXXXXXEPNEYVRNLERRKAFSHWLAHTAEERIEEEVS: 430 SecStr :SSEE SS EE SHHHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHHHHHHT ------- HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH: ExpBur :eeeeeeeeeebeeeeeebeeeeeebeeeeeeeeeeeeeeeeeeeeeeebeebeeebeebee-------eeeeeeebeebbeeeeebbeeeebeeeeeeee: queryA 1324:LTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLD:1423 :* ****** *** ** ** *** *** ***** **** *** ***** ** * * **** * ** * *** * ********: 6lk8_CA_1 431:LYGPERHVEAVFSFLTGXXISDACRLAQXXXXHRLSLLLSQMVGSQEMRELISLQLVDWNKLQVDHXXQEERLRVFCLLSGTPVWRSSDNRSINVCSQLD: 530 SecStr :HHTTT SSHHHHHHH -- HHHHHHH ---- HHHHHHTTTT STHHHHHHHHHHHHHHHHHH -- HHHHHHHHHHTS TTT TTT STTGGGGTS : ExpBur :ebeeeeeeeeeeebeee--eeeeeeeee----eeeeeeeeeeeeeeeebeeebeebeeebeeeeee--eeeeebebbeeeeebeebeeeebeeeeeeeee: queryA 1424:WKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPL--RDVCFHLLKLYSDRHYDLNQLLEPRSITADPLD:1521 :*** ** **** ***** * ** ** *** **** ******* * *** * * * ****: 6lk8_CA_1 531:WKRTLAVHLWYMLPPTATIAQALRLYERAFQEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDVCVHLLKLYSERQXXXXQLLDPSSVTPDPLD: 630 SecStr :HHHHHHHHHHHH SSHHHHHHHHHHHHHH --------------------------------- HHHHHHHHHT ---- THHHHHHTTS SS: ExpBur :eebebeebbebbbeebeebeeebbebeeeeeee---------------------------------eeeeeeebeeebeeee----eeeeeeeeeeeeee: queryA 1522:YRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKA:1621 :******** ** ******** * * **** *** ************* *** ***** * * * *** *** ** * *** * *****: 6lk8_CA_1 631:YRLSWHLWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVLLHIPHPHIREAGVRELLNRQCVVRESPESLAKENFLIHRLCVPAQWVHEAKA: 730 SecStr :HHHHHHHHHHHHHH SS SHHHHHHHHHHHHHHTT HHHHHHHHHHS SHHHHHHHHHHHHHHTSSTHHHHSTTTHHHHHHHHS S HHHHHH: ExpBur :eeebeeeeebbeeeeeeeeeeeeeeeeeeebeeeebeeeeeebebeeeeeeeeeeebeeeeeeeeeeebeeebeeeeeeeebeeeeeeeeeeeeebeeee: queryA 1622:VRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHI:1721 : * * * ** **** ** ** * ** ** ******* ** * * ** ** : 6lk8_CA_1 731:IRSRRDXXXXXXXXYLLKGHQXXXXXKLVTRHLAADAXXXXXXXXXXSFLGELSNPEHCKHIQXXXXXXXXXLDYIRVIDMLNLIXXXXXXGCELEKLHT: 830 SecStr :HHHHH -------- HHHHH ----- HHHHHHHHT ---------- HHHHHHHHHHHHHH --------- HHHHHHHHHHH ------ HHHHHHHH: ExpBur :bbeeee--------eeebeee-----eeeeeeeeeee----------eeeeeeeeeeeeeeee---------eeeeeeeeeeeee------eeeeeeeee: queryA 1722:KVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDS:1771 :** *** * ******** ******* * ** ***: 6lk8_CA_1 831:KVMSLCXXXXXXXXYTAKDRLAQSEMAKRVANILXXXXXXXQPPESMSDS: 880 SecStr :HHHHH -------- HHHHHHHHHHHHHHHHHH ------- HHHHHHH : ExpBur :eeeeee--------eeeeeeeeeeeeeebeeeee-------eeebeeeee: |