Protein Model on 6lk8_CA_1 focusing on 1100-th site
(TEMPLATE: 
6lk8
)Protein Model on 6lk8_CA_1 focusing on 1100-th site
(TEMPLATE: 6lk8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(6lk8_CA auth_asym_id:g) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 1100 | P | 208 | 208 | P | T | e | 25.6 |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(NUP98_HUMAN) | CA 1 (g) | polymer(polypeptide(L)) [607 aa] | Nuclear pore complex protein Nup96 :A0A1L8HBE3_XENLA | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6lk8_CA_1 identity=51.0% |
queryA 1025:EICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSVSVQECRTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPREKSV:1124
: **** ** * * ******* * * * * * **** ** * **** ******* *** ****:
6lk8_CA_1 142:DVRSPRL-FPSSHAKRTSSM--GLLQSKFASPSISRISXTAQGSHSP------XILPVTPWSVPAPLAPXXVIPRPAPEXXXRTVGTRRQQELVPLEKSV: 232
SecStr : HHHHH-HHH TT --HHHHHHHT HHHH - HHHHH ------- TTHHHHHTHHHH -- TTTTT --- HHHHHHHHHHHHHHHHH:
ExpBur :eeeeeee-eeeeeeeeeeee--eeeeeeeeeeeeeeee-eeeeeeee-------eeeeeeeebeeebee--eeeeeeee---eeeeeeeeeeeeeeeeee:
queryA 1125:TYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLK:1224
:* * * ** ** *** ********* * * * * * *** * ****** ** * *** **:
6lk8_CA_1 233:THGRGSLLIDMGLFMXXXXXVGWGPNWTLVHNGDKLTXXXNAEEDQNXDTIDYGFLXXXTSAKSXXXSPFKVHMEKXXXXXK--SRELQSYLMPLEIELK: 330
SecStr :HHHHHHHHHHHHHH ----- HHHHHHHHHHHHHH --- HHHHH - --- --- ----- --HHHHHHHHHHHHTTSS:
ExpBur :eeeeeeeeeeeeeee-----eeeeeeeeeeeeebeee---eeeeeee-eeeebeee---eeeee---eeeeeeeee-----e--eeeeeeeeeeeeeeee:
queryA 1225:HSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVS:1323
: * * ** ** *** ***** ** * * ** * ******* *** ** ** ** **** *** ** ** ******:
6lk8_CA_1 331:NSSVDRSAQCPHFKPNAGVAAIHDYAGWVRNLSNEAGELEAVVKQWGLTWTLCESLWGQLKXXXXXXXEPNEYVRNLERRKAFSHWLAHTAEERIEEEVS: 430
SecStr :SSEE SS EE SHHHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHHHHHHT ------- HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH:
ExpBur :eeeeeeeeeebeeeeeebeeeeeebeeeeeeeeeeeeeeeeeeeeeeebeebeeebeebee-------eeeeeeebeebbeeeeebbeeeebeeeeeeee:
queryA 1324:LTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLD:1423
:* ****** *** ** ** *** *** ***** **** *** ***** ** * * **** * ** * *** * ********:
6lk8_CA_1 431:LYGPERHVEAVFSFLTGXXISDACRLAQXXXXHRLSLLLSQMVGSQEMRELISLQLVDWNKLQVDHXXQEERLRVFCLLSGTPVWRSSDNRSINVCSQLD: 530
SecStr :HHTTT SSHHHHHHH -- HHHHHHH ---- HHHHHHTTTT STHHHHHHHHHHHHHHHHHH -- HHHHHHHHHHTS TTT TTT STTGGGGTS :
ExpBur :ebeeeeeeeeeeebeee--eeeeeeeee----eeeeeeeeeeeeeeeebeeebeebeeebeeeeee--eeeeebebbeeeeebeebeeeebeeeeeeeee:
queryA 1424:WKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPL--RDVCFHLLKLYSDRHYDLNQLLEPRSITADPLD:1521
:*** ** **** ***** * ** ** *** **** ******* * *** * * * ****:
6lk8_CA_1 531:WKRTLAVHLWYMLPPTATIAQALRLYERAFQEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDVCVHLLKLYSERQXXXXQLLDPSSVTPDPLD: 630
SecStr :HHHHHHHHHHHH SSHHHHHHHHHHHHHH --------------------------------- HHHHHHHHHT ---- THHHHHHTTS SS:
ExpBur :eebebeebbebbbeebeebeeebbebeeeeeee---------------------------------eeeeeeebeeebeeee----eeeeeeeeeeeeee:
queryA 1522:YRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKA:1621
:******** ** ******** * * **** *** ************* *** ***** * * * *** *** ** * *** * *****:
6lk8_CA_1 631:YRLSWHLWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVLLHIPHPHIREAGVRELLNRQCVVRESPESLAKENFLIHRLCVPAQWVHEAKA: 730
SecStr :HHHHHHHHHHHHHH SS SHHHHHHHHHHHHHHTT HHHHHHHHHHS SHHHHHHHHHHHHHHTSSTHHHHSTTTHHHHHHHHS S HHHHHH:
ExpBur :eeebeeeeebbeeeeeeeeeeeeeeeeeeebeeeebeeeeeebebeeeeeeeeeeebeeeeeeeeeeebeeebeeeeeeeebeeeeeeeeeeeeebeeee:
queryA 1622:VRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHI:1721
: * * * ** **** ** ** * ** ** ******* ** * * ** ** :
6lk8_CA_1 731:IRSRRDXXXXXXXXYLLKGHQXXXXXKLVTRHLAADAXXXXXXXXXXSFLGELSNPEHCKHIQXXXXXXXXXLDYIRVIDMLNLIXXXXXXGCELEKLHT: 830
SecStr :HHHHH -------- HHHHH ----- HHHHHHHHT ---------- HHHHHHHHHHHHHH --------- HHHHHHHHHHH ------ HHHHHHHH:
ExpBur :bbeeee--------eeebeee-----eeeeeeeeeee----------eeeeeeeeeeeeeeee---------eeeeeeeeeeeee------eeeeeeeee:
queryA 1722:KVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDS:1771
:** *** * ******** ******* * ** ***:
6lk8_CA_1 831:KVMSLCXXXXXXXXYTAKDRLAQSEMAKRVANILXXXXXXXQPPESMSDS: 880
SecStr :HHHHH -------- HHHHHHHHHHHHHHHHHH ------- HHHHHHH :
ExpBur :eeeeee--------eeeeeeeeeeeeeebeeeee-------eeebeeeee:
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[assembly_id:1]
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