Protein Model on 7fik_CA_1_DA_1
(TEMPLATE: 
7fik
)Protein Model on 7fik_CA_1_DA_1
(TEMPLATE: 7fik
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | CA 1 (g) | polymer(polypeptide(L)) [603 aa] | Nuclear pore complex protein Nup98-Nup96 :A0A1L8HBE3_XENLA | |
| 2 | b | DA 1 (h) | polymer(polypeptide(L)) [288 aa] | Protein SEC13 homolog :Q6GNX0_XENLA | 1135M 1139M 1140G 1141R 1142S 1143F 1144R 1145V 1146G 1147W 1148G 1149P 1151W 1154A(V) 1156S(N) 1193P 1195K 1196V 1197H 1198L(M) 1199E 1200K 1201L 1202S 1204R(E) 1507N(C) 1510L 1511E(D) 1512P 1519P 1520L 1522Y 1543Q(H) 1546G 1547V(T) 1550A 1554G(A) 1577I 1587T(N) 1588R 1622V(I) 1623R 1625H(R) 1626M(R) 1627E(D) (identity: 68.9 %/59.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7fik_CA_1 identity=59.3% |
queryA 1117:LVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQ:1216
:*** ***** * * ** ** ***************** * ****** ***** * * :
7fik_CA_1 1044:LVPLEKSVTHGRGSLLIDMGLFMGRSFRVGWGPNWTLVHNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFKVHMEKLSLEQK--SRELQSYL:1141
SecStr : S SHHHHTTS SSSHHHHTTT B GGG B ---------------------------------- TT-- HHHHH:
ExpBur :eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebee----------------------------------eeeeeeeeeeeeeee--eebeebbe:
Contact : b bbbbbbbbbbb b b b b bbbbbbbb b
queryA 1217:TPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTAT:1315
: *** ** * * ** ** *** ***** ** * * ** * ******* *** ** **** *** ** ** :
7fik_CA_1 1142:MPLEIELKNSSVDRSAQCPHFKPNAGVAAIHDYAGWVRNLSNEAGELEAVVKQWGLTWTLCESLWGQXXXXXXXXXXXNEYVRNLERRKAFSHWLAHTAE:1241
SecStr :HHHHHHHHTEEEE SSSS EEEE TT SHHHHHHHHHHHHHHH TTS HHHHHHHHHHHHHHHHH ----------- HHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbeebbeebeeeeeeebbbbebeeeeebbeebbebbeebeeebeeeeebbebbbebbebbebbbee-----------eeeeeeeeebeebeebbeeebe:
queryA 1316:PQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQ:1415
: ******* ****** *** *** ** *** ****** ***** **** *** ***** ** * ** **** * ** * *** * :
7fik_CA_1 1242:ERIEEEVSLYGPERHVEAVFSFLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEMRELISLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRS:1341
SecStr :HHHHHHHHHH S TTTHHHHHHHT HHHHHHHGGGT HHHHHHHS HHHHHHHHHHHHHHHHHTT S SS HHHHHHHHHHHT SEEE TT E:
ExpBur :eebeeebeeeeeeeebebebbbbbbeeeeebbeeeeeeeeeebeeeeeeeeebeeeeeeebeebbeebeeeebeeeeeeebebebbebeebeeeeeeeee:
queryA 1416:INVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPR:1513
:*********** ** **** ***** * ** ** *** *** *** *** * **** ******* * *** *** * :
7fik_CA_1 1342:INVCSQLDWKRTLAVHLWYMLPPTATIAQALRLYERAFQEHXXGEPYACYPLPPYLEDCSISLGDEPSAKFSSLQRDVCVHLLKLYSERQYDLCQLLDPS:1441
SecStr :EETTTT HHHHHHHHHHTTS SS HHHHHHHHHHHHT -- S TTTSTT SS SHHHHTT HHHHHHHHHH S S HHHHT HH:
ExpBur :bbbbeebebbbbbbbbbebbbeeeeebeebbeebeebbeee--eeeebeebebeeeeeeeeeeeeeeeeebeeeebbbbbbbbbbeeeeeeebeebbebe:
Contact : b bbb
queryA 1514:SITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPA:1613
:* * ************ ** ******** * * **** *** ************* *** ***** * * * *** *** ** * ***:
7fik_CA_1 1442:SVTPDPLDYRLSWHLWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVLLHIPHPHIREAGVRELLNRQCVVRESPESLAKENFLIHRLCVPA:1541
SecStr :HHSSSSS HHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHHT HHHHHHHTTSS HHHHHHHHHHHHHHH SS HHHHHHHHHHHHHS H:
ExpBur :bbbeeeebebbbbbbbbbbebeebeebeeeebeebbeebbebbbbeebebbbbbbbbbbeeeeebbeebeebbeeebebeeeeebeeebebbeeebebee:
Contact : bb b b bb b b b bb
queryA 1614:KWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSG:1713
: * ***** * * * *** * * ** **** **** ** ***** ** ** * ** ****** * ********* ** *** **:
7fik_CA_1 1542:QWVHEAKAIRSRRDGDRHKEALYLLKGHQWNPCHKLVTRHLAADAVINENYRYLQSFLGELSNPEHCKHIQDWETAGKVYLDYIRVIDMLNLIQQDESSG:1641
SecStr :HHHHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHTHHHHHHHHT HHHHHHHHHHT SHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHTTT H:
ExpBur :ebbbebbbeebeeeeeeeebbebbeebeeeeebbeebbeeebbebbeeeebeebeebbeebeeeeeeeebeebeeebebbbbbbebeebbeebeeeeeee:
Contact : bb bbb
queryA 1714:NDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHP:1764
: ** ** ** *** * * ** ******** ******* ******* *:
7fik_CA_1 1642:CELEKLHTKVMSLCKWVELIHCYTAKDRLAQSEMAKRVANILRVVLSLQQP:1692
SecStr :HHHHHHHHHHHHHHHHHTT SSHHHHHHHHHHHHHHHHHHHHHHHHH :
ExpBur :eebeebeeebeebeeebeeeeeeeeebeebeebbeebbeebeeebeeeeee:
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[assembly_id:1]
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