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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | C 5 (AE) | polymer(polypeptide(L)) [543 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
2 | b | D 5 (AF) | polymer(polypeptide(L)) [285 aa] | Protein SEC13 homolog :SEC13_HUMAN | 1514S 1577I 1587T 1588R 1622V 1626M 1627E 1656S 1733I 1734Q 1735C 1736Y 1739K (identity: 100.0 %/92.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7peq_C_5 identity=92.0% |
queryA 1213:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC:1312 :****************************************************************************************************: 7peq_C_5 333:KLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSC: 432 SecStr : HHHHHHHHTTEEEEESSS EEEEEE STT STTSSTT SSSSSTTTTSHHHHHHHHHHHHHSS SS S SS HHHHHHHHHHHHHHHH: ExpBur :eeeeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebbeebeeeeeeeeeeeeebeeeeeebeeebeeeeeeeeeeeeeeeeeeeebeeebeeeeeeebbe: queryA 1313:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE:1412 :****************************************************************************************************: 7peq_C_5 433:TATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSE: 532 SecStr :HHHHHHTTHHHHHTTT TTHHHHHHGGGS HHHHHHHHHHTT SHHHHHHTT S STHHHHHHHHHHHHHSTTTTTT HHHHHHHHHTTT SSSS GG: ExpBur :eeeeeeeeeeeebeeeeeebebeebeeeebeeebeebbeeeeeeeeeeeeeeeeeeeeebeebeeeeeebeeeeeeeeeeebeeeeebeeeebeeeeeee: queryA 1413:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEP:1512 :******************************************* **************************: 7peq_C_5 533:KKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRDVCFHLLKLYSDRHYDLNQLLEP: 632 SecStr :G GGGTTTS HHHHHHHHHSSS TTTS HHHHHHHHHHSS ------------------------------- SS HHHHHHHHTSTTSS HHHHHHH: ExpBur :beeeeeeeeeeeebeebebeebbeeeeeeeeeeebebeeeeee-------------------------------eeeeeebeeeeeebebeeebeeeeee: queryA 1513:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP:1612 :****************************************************************************************************: 7peq_C_5 633:RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVP: 732 SecStr :HHTT S HHHHHHHHHHHHTTT S HHHHHHHHHHHHHHHHHHT SHHHHHHHHS S HHHHHHHHHHHHHH STT SSS SSSSSSGGGT : ExpBur :eeeeeeeeeebbebbebeebeeeeeeeeeeeeeeebbeebbeebeeeebbebbeebbbeeeeeeebeeeeeeebeeebeebbeeeeeebeeeeeeeebee: Contact : b b bb queryA 1613:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS:1712 :****************************************************************************************************: 7peq_C_5 733:AKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCS: 832 SecStr :HHHHHHHHHHHHHHHS HHHHSHHHHTTT SS HHHHHHHHGGG TT HHHHHHHHHHHHHHHHHTT S SHHHHHHHHHHHHHHHHH SS S : ExpBur :eeeebebbbebeeeeeebeebbeeebeeebbeeeeeeeeebebeeeeeeeeeeeeeeebeeeeeebeeeeeeeeeeeeebeeebbeeeeebeeeeeeeee: Contact : b bb b queryA 1713:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR:1802 :****************************************** ********************************: 7peq_C_5 833:GNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLXXXXXXXXXXXXXXXXSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELR: 922 SecStr : SHHHHHHHHHHHHHTHHHHT SHHHHHHHHHHHTTTTT----------------S TTSSSTTTTS S HHHHH : ExpBur :eeeeeebeebbeeeeebeeeeeeeeeeebebbeebeeebeee----------------eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee: Contact : bbbb b |