[pdbjlvh2]Protein Model on 3bg0_C_1_D

Protein Model on 3bg0_C_1_D_1 (TEMPLATE: 3bg0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2] [assembly_id:5]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(NUP98_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [420 aa]	Nucleoporin NUP145 :NU145_YEAST
2	b		D 1 (D)	polymer(polypeptide(L)) [281 aa]	Protein SEC13 homolog :SEC13_HUMAN	1513R 1554G(A) 1555Q 1557E 1558S(F) 1580K(D) 1587T(M) 1588R 1622V(L) 1623R(K) 1626M(Y) (identity: 36.4 %/26.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bg0_C_1 identity=26.4%

queryA      1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
                :**      *      * ***           *  * **       *  **  *    *  * *   **     * *   **  *        *      *:
3bg0_C_1     153:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 247
SecStr          :HHHHHHHHHHTTTSHHHHHTTTT--T S HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHH-HTTS  HHHHHHHHHHHHHTTS--SS  S HHHHHH:    
ExpBur          :ebbeebbebbeeebbeebeebbe--eeeeebebbbbebbbeeeeebbeebeebeeeebbebbe-ebeeeeeebeeebeeebeeeee--eeeeeeebbbbb:    

queryA      1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
                :  ** * *   *   *     *   *   *   * *      *           *    *       *            *   *             **:
3bg0_C_1     248:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 324
SecStr          :HHHHHS SSSSTT SGGGG--GTS HHHHHHHHHHT   SSS HHHHHHHHHHHS   SS ------HHHHHHH----HHHS TTHH-----------HH:    
ExpBur          :bbbbbbbbbeeeeebeebe--eebeebbbbbbbbbbbebeeeebeebbebbbeebebeeee------ebbbbbb----bbbbeeebb-----------eb:    

queryA      1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
                :*           * *  *   **    * *   **       *           * ***   *     **          *     *  *   **     :
3bg0_C_1     325:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 410
SecStr          :HH----------HHTTS -SSS HHHHHHHHHHHHTTTSS   HHHHHHHHHHHHHHHHHTT HHHHHHHHHT S HHHHHHHHHHHHHHHTGGGST---:    
ExpBur          :be----------ebeeeb-eebebbbbbbbbbbbebeeebebeeebbbebbeebbebbbebeebbbbbbbbbbbbeeebbeebbeebbeebbeebee---:    
Contact         :              b                                        bb bb                     b      bb          

queryA      1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
                :          *  *   *  * *     *:
3bg0_C_1     411:-STNDHILNRLKIPSQLIFNAQALKDRYE: 438
SecStr          :-TTTS HHHHTT  HHHHHHHHHHHHHHH:    
ExpBur          :-eeeeebbeebebbeebbeebbeeeeeee:    
Contact         :                       bb  b

Protein Model on 3bg0_C_1_D_1 (TEMPLATE: 3bg0 )

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