Protein Model on 3nf5_B_1 (TEMPLATE: 3nf5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(NUP98_HUMAN) B 1 (B) polymer(polypeptide(L)) [152 aa] Nucleoporin NUP116 :Q6FU56_CANGA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3nf5_B_1 identity=32.6%
queryA       741:YYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNL----DDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCL: 836
                :**  ** * **          *     * * ** * *   * *    *    ** *      *  *      *  * ***  *        * **  *  :
3nf5_B_1      16:YYISPSLDTLATLSKYEIQ-KVENLVVGNKQYGKIEFLDPVDLSDIPLGSICDDLVVFQPUSVLLYNXXXXVPEKGKGLNVRARISCYNCYPLDKSTRKP: 114
SecStr          :EEEES HHHHTTS TTGGG-GB S EEEETTTEEEEESS B  TTS GGGTBTTTEEEETTEEEE  ----   TTSTT S EEEEE S   B TTT  B:    
ExpBur          :bebeeeeeebeeeeeeebe-ebeebbbbbebebebebeeebebeebebebbeeebbbbeeeeeeeee----eeeeeebbbbebebbbeebbbeeeeeeee:    

queryA       837:IKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSH: 879
                :** *       *   *          *  * *  *   * * *:
3nf5_B_1     115:IKDPNHRIUERYSEKLKKIPH---THFESYDPASGTYCFTVDH: 154
SecStr          :   TTSTHHHHHHHHHTT TT--- EEEEEETTTTEEEEEESS:    
ExpBur          :beeeeeebbeeeeeebeeeee---beeeebeeeebebbbbbee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123