CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(NUP98_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [434 aa] | Nucleoporin NUP145C :NU145_YEAST |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3iko_B_1 identity=26.4% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 3iko_B_1 153:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 247 SecStr :HHHHHHHHHHHHHHHHHHHHHHH--H HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHT-TTTS HHHHHHHHHHHHHHTT--T S HHHHHH: ExpBur :ebbeebbebbeeebbeebeeebe--ebeeebebbbbbbbbeebeebbebbeebeeeebbeebe-ebeebeeeebeebbeebeebee--eeeeeeebebeb: queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 3iko_B_1 248:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 324 SecStr :HHHHTT SSSSTT GGGGG--GTS HHHHHHHHHHTTTTTTS HHHHHHHHHTTS TT ------HHHHHHH----HHHTGGGHH-----------HH: ExpBur :bbbbbbebbeeeeebeebe--eebebbbbbbbbbbbbbbeeeebeebbebbbeebebeeee------eebbbbe----bbbbeeebe-----------eb: queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 3iko_B_1 325:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 410 SecStr :HH----------HHHTT - SS HHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHTTT HHHHHHHHHT S HHHHHHHHHHHHHTTTTGGGS---: ExpBur :be----------ebeeeb-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbebebbbbbbbbbbbbbeeebbeebbeebbeebbeebee---: queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * * * * * *: 3iko_B_1 411:-STNDHILNRLKIPSQLIFNAQALKDRYE: 438 SecStr :-SHHHHHHHTTT HHHHHHHHHHTTTTT: ExpBur :-eebbeebbebebbeebbeebebeebeee: |