Protein Model on 5e0q_B_1_A_1
(TEMPLATE: 
5e0q
)Protein Model on 5e0q_B_1_A_1
(TEMPLATE: 5e0q
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [152 aa] | Nuclear pore complex protein Nup98-Nup96 :J7I6Y1_XENTR | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [126 aa] | Anti-Nup98 Nanobody TP377 | 730H 731P 732A 735I 757K(N) 758G 759E 782N 783L 784T 785N 786L 787N(D) 789D 790D(S) 791I 802Y 807Q(N) 813E (identity: 78.9 %/72.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5e0q_B_1 identity=72.2% |
queryA 730:HPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPT: 829
:******** ******* ** * ***** ***** * ******* ****** ** ********* ** ** *** ****** * **** *** :
5e0q_B_1 3:HPAGIILTRDSYYTIPSMEELARSVDENGECIVNGFTIGREGFGSIYFEGIVNLTNLDLDSIVHIRRKEVIVYVDDQNKPPLGEGLNRPAQVTLDEVWPI: 102
SecStr : TT STTEEEES HHHHHT TTS EEEEEEEEETTTEEEEEEEEEE TT HHHHEEEETTEEEESSSSTT STTSTT S EEEEE S E:
ExpBur :bebebebeeebbebebebeebeeeeeeeeebebebbbbbeeebbbbebeeebebbebebbebbbbeeeebebbeeeeeeeeeeeebbeebebbbeebbbe:
Contact :bbb b bbb bbbbbb bbb b b b
queryA 830:DKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
:***** * ** ** ** ** ******** **** ******* **:
5e0q_B_1 103:DKTSRSMITSPERLSEMNYKSKLENASRKQGAQFVDYRPESGSWVFKVNHF: 153
SecStr :ETTTTEE HHHHHHTTHHHHHHHHHHHTT EEEEEETTTTEEEEEES :
ExpBur :beeeeeebeeeeebeeeebebebeeebeeeebebeebeeeebbbbbebeeb:
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[assembly_id:1]
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