Protein Model on 1ko6_A_1_B_1 (TEMPLATE: 1ko6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NUP98_HUMAN) A 1 (A) polymer(polypeptide(L)) [152 aa] Nuclear Pore Complex Protein Nup98 :NUP98_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [6 aa] Nuclear Pore Complex Protein Nup98 :NU98_HUMAN 797K 798E 799V 848Y 852L 859Q 873W 875F 877V 879H 880F (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ko6_A_1 identity=100.0%
queryA       729:MHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWP: 828
                :****************************************************************************************************:
1ko6_A_1      36:MHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWP: 135
SecStr          :  SS  B  STTEEEES HHHHHHHS TTS  EESSEEEEETTTEEEEE S EE TT BHHHHEEEETTEEEESSSTTS   TTSTTSS EEEEE S   :    
ExpBur          :ebebebebeeeebebeeebeebeeebeeeeebebeebbbbbeeebbbebeeebebeebebbebbbbeeeebebbeeeeeeeeeeeebbbebebbbeebbb:    
Contact         :                                                                    bbb                             

queryA       829:TDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
                :****************************************************:
1ko6_A_1     136:TDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 187
SecStr          :  TTT S    HHHHHHHTHHHHHHHHHHHTT EEEEEEGGGTEEEEEES  :    
ExpBur          :ebeeeeeebeeeeebeeeebeeebeeebeeeebebeebeeeebbbbbebeee:    
Contact         :                   b   b      b             b b b bb                                                


Input Residue Numbers for Focused Sites

ex) 2,15,123