CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RB_HUMAN) | F 1 (D) | polymer(polypeptide(L)) [584 aa] | Interleukin-6 receptor subunit beta :IL6RB_MOUSE | |
2 | b | O 1 (O) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 131N 133S(T) 145E(Q) 309Y (identity: 50.0 %/73.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8qy5_F_1 identity=73.1% |
queryA 24:LLDPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISG: 123 :** ***** ** **** ***** ***** * *** ******** * ** * **** ******* ******* *** ****** * **: 8qy5_F_1 24:LLEPCGYIYPEFPVVQRGSNFTAICVLKEACLQHYYVNASYIVWKTNHAAVPREQVTVINRTTSSVTFTDVVLPSVQLTCNILSFGQIEQNVYGVTMLSG: 123 SecStr : SEEEESSS EEETTSEE EEEE HHHHHHTT GGGEEEEETTEE TTTEEE SSSEEEE EES SEEEEEEEEEETTTEEEEEEEEEEEEE: ExpBur :eeeebbebeeeebebeeeeebebebebeeebbeeeebebeebebbbeeeebeeeebeeeeeebbbbebeebeeeebebbbbbebeeeeeeebeebebebb: queryA 124:LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPN: 223 : ** ** ** ******* * * ** **** **** ******** ** ** * * ** * * * **************** * ****** **** : 8qy5_F_1 124:FPPDKPTNLTCIVNEGKNMLCQWDPGRETYLETNYTLKSEWATEKFPDCQSKHGT--SCMVSYMPTYYVNIEVWVEAENALGKVSSESINFDPVDKVKPT: 221 SecStr : EEEEEEEETTS EEEEE S SS EEEEEEE SSSB EE SSSS--EEE SS TTS EEEEEEEEETTEEEE EEE GGGGEE : ExpBur :bebeebeebebbbbbeeebebebeeeeebebebebbbebeeeeeebeebebeebe--ebebebebeeeeebebbbbbebeeeeeebeeeebbbbeebebe: Contact : b b b queryA 224:PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE: 323 :** **** *********** * ** *********** * * *** * * ****************** * ************** ***: 8qy5_F_1 222:PPYNLSVTNSEELSSILKLSWVSSGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDSGKGYWSDWSEEASGTTYE: 321 SecStr : EEEEEEE SS TTEEEEEEE HHHHTS EEEEEEEEETT EE TTGGGSS SEEEEES TT EEEEEEEEEETT S EEEE : ExpBur :ebeebebeeeeeebbbbebebebebeeeebebbbbbbbbeeeeeeeeebeeeebeeeeeeeebeebeeebebbbebebbbeeeeeeebeebeebebebbb: Contact : b queryA 324:DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQA: 423 :**** ****** *** * ** * * ** ** *********** ** ** * *** * ********** * * ** **** ******* *: 8qy5_F_1 322:DRPSRPPSFWYKTNPSHGQEYRSVRLIWKALPLSEANGKILDYEVILTQSKSVSQTYTVTGTELTVNLTNDRYVASLAARNKVGKSAAAVLTIPSPHVTA: 421 SecStr : SS EEEEEE TT SEEEEEEEEE HHHH S EEEEEEEEE TTS EEEEESSSEEEEEEESS EEEEEEEEESS B EEEEE TT : ExpBur :eebeeebbbbbbeeeeeeeeebebebbbeebeeebbbbeeebbbbebeeeeeeeeeeebeeeeeebebeeeebebbbbbebeeeebeebebbbbbeeeee: queryA 424:THPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGP: 523 : * ******** ****** * * ********** *** ****** ** ** *** * ***** ****** * *** ** ******* * **: 8qy5_F_1 422:AYSVVNLKAFPKDNLLWVEWTPPPKPVSKYILEWCVLSENAPCVEDWQQEDATVNRTHLRGRLLESKCYQITVTPVFATGPGGSESLKAYLKQAAPARGP: 521 SecStr : B EEEEEEEETTEEEEEEE SS SEEEEEEEE SSS EEEEEETT EEE S TT EEEEEEEEEETTEE B EEEEEESS SS : ExpBur :eeebeebeeeeeeeebebbbeebeeebebbbbbbbebeeeeeeeeebbbbeeeeeebebeeebeeeebbebbbbbbbeebbbeeeeeebbbebeebeebb: queryA 524:TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFT: 609 :************** *** *** ******** * *** * * * ************* **************************: 8qy5_F_1 522:TVRTKKVGKNEAVLAWDQIPVDDQNGFIRNYSISYRTSVGKEMVVHVDSSHTEYTLSSLSSDTLYMVRMAAYTDEGGKDGPEFTFT: 607 SecStr : EEEEEE SS EEEEE TTT S EEEEEEE SSS EEEEEETT SEEEE S TT EEEEEEEEETTEEEE EEE : ExpBur :ebeeeeeeeeebbbbbeebeeebbebebeebbbbbebeeeeeeeeebeeeeeeeebeebeeeeebbbebbbebeeeeeebeeeebe: |