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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RB_HUMAN) | D 1 (F) | polymer(polypeptide(L)) [583 aa] | Interleukin-6 receptor subunit beta :IL6RB_MOUSE | |
2 | b | T 1 (F) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 131N 133S(T) (identity: 50.0 %/72.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8qy4_D_1 identity=72.9% |
queryA 25:LDPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGL: 124 :* ***** ** **** ***** ***** * *** ******** * ** * **** ******* ******* *** ****** * ** : 8qy4_D_1 25:LEPCGYIYPEFPVVQRGSNFTAICVLKEACLQHYYVNASYIVWKTNHAAVPREQVTVINRTTSSVTFTDVVLPSVQLTCNILSFGQIEQNVYGVTMLSGF: 124 SecStr : SEEEESSS EEETTS EEEEEEE HHHHHHHT GGGEEEEETTEE S EEEEETTEEEEEESS SEEEEEEEEEETTTEEEEEEEEEEEEE : ExpBur :eeebbebeeeebebeeeeebebebebeeebbeebebebeebbbebeeeebeeebebeeeeebbbbebeebeeeebebebbbebeeeeeeebeebebebbb: queryA 125:PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNP: 224 :** ** ** ******* * * ** **** **** ******** ** ** * * ** * * * **************** * ****** **** *: 8qy4_D_1 125:PPDKPTNLTCIVNEGKNMLCQWDPGRETYLETNYTLKSEWATEKFPDCQSKHGT--SCMVSYMPTYYVNIEVWVEAENALGKVSSESINFDPVDKVKPTP: 222 SecStr : EEEEEEEETTS EEEEE S SS EEEEEETTEE EE SSSS--EEE SS TTS EEEEEEEEETTEEEE EEE GGGGEE : ExpBur :ebeebeebebebebeeebebebeeeeebebebebbbebeeeeeebeebebeebe--ebebebebeeeeebebbbebebeeeeeebeeeebbbbbebebee: Contact : b b queryA 225:PHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED: 324 :* **** *********** * ** *********** * * *** * * ****************** * ************** ****: 8qy4_D_1 223:PYNLSVTNSEELSSILKLSWVSSGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDSGKGYWSDWSEEASGTTYED: 322 SecStr : EEEEEEE SS TT EEEEEE HHHHTS EEEEEEEEESS S EE GGGG S SEEEE S TT EEEEEEEEEETT S EEEE : ExpBur :beebebeeeeeebebbebebeeebeeeebebbbbbbbbeeeeeeeeebeeeebeeeeeebebeebeebeebbbebebbbeeeeeeebeebeebebebbbe: queryA 325:RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQAT: 424 :*** ****** *** * ** * * ** ** *********** ** ** * *** * ********** * * ** **** ******* * : 8qy4_D_1 323:RPSRPPSFWYKTNPSHGQEYRSVRLIWKALPLSEANGKILDYEVILTQSKSVSQTYTVTGTELTVNLTNDRYVASLAARNKVGKSAAAVLTIPSPHVTAA: 422 SecStr : SS EEEEEE TT SEEEEEEEEE HHHH S EEEEEEEEE TTS EEEEEESSSEEEEEEESS EEEEEEEEESS B EEEEE TT : ExpBur :ebeeebbbbbbeeebeeeeebbbebbbeebeeeebbbeeebbbbebeeeeeeeeeeeeeeeebebebeeeebebbbbbebeeeebeebebbbbbeeeeee: queryA 425:HPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPT: 524 : * ******** ****** * * ********** *** ****** ** ** *** * ***** **** * * *** ** ******* * ***: 8qy4_D_1 423:YSVVNLKAFPKDNLLWVEWTPPPKPVSKYILEWCVLSENAPCVEDWQQEDATVNRTHLRGRLLESKCYQITVTLVFATGPGGSESLKAYLKQAAPARGPT: 522 SecStr : B EEEEEEEETTEEEEEEE SS SEEEEEEEE SSS EEEEEEETT SEEE S TT EEEEEEEEEETTEEEEEEEEEEESS SS E: ExpBur :eebeeeebeeeeeebebbbeebeeebebbbbbbbeeeeeeeeeeebbbbeeeeeebbbeeebeebebbebbbbbbbeebbbeeeeeebbbebeebeebbe: queryA 525:VRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFT: 609 :************* *** *** ******** * *** * * * ************* **************************: 8qy4_D_1 523:VRTKKVGKNEAVLAWDQIPVDDQNGFIRNYSISYRTSVGKEMVVHVDSSHTEYTLSSLSSDTLYMVRMAAYTDEGGKDGPEFTFT: 607 SecStr :EEEEEE SS EEEEEE TTT S EEEEEEEESSS EEEEEETT EEEE S TT EEEEEEEEETTEEEE EEE : ExpBur :beeeeeeeeebbbbbeebeeebbebebeebbbbbebeeeeeeeeebeeeeeeeebeebeeeeebbbebbbebeeeeeebeeeebe: |