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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RB_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [584 aa] | Interleukin-6 receptor subunit beta :IL6RB_MOUSE | |
2 | b | D 1 (E) | polymer(polypeptide(L)) [157 aa] | Interleukin-6 :IL6_HUMAN | 24L 25L 26D(E) 27P 28C 34E 57Y(H) 58F(Y) 71H 100Q 111L(I) 112E 113Q 114N 115V 116Y 117G (identity: 76.5 %/72.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8qy6_A_1 identity=72.9% |
queryA 24:LLDPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISG: 123 :** ***** ** **** ***** ***** * *** ******** * ** * **** ******* ******* *** ****** * **: 8qy6_A_1 24:LLEPCGYIYPEFPVVQRGSNFTAICVLKEACLQHYYVNASYIVWKTNHAAVPREQVTVINRTTSSVTFTDVVLPSVQLTCNILSFGQIEQNVYGVTMLSG: 123 SecStr : SEEEESSS EEETTSEE EEEE HHHHHHH GGGEEEEETTEE TTTEEEEETTEEEE EES SEEEEEEEEEETTTEEEEEEEEEEEEE: ExpBur :eeeebbebeeeebebeeeeebebebebeeebbeeeebebeebebebeeeebeeeebeeeeeebbbbebeebeeeebebbbbbebeeeeeeebeebebebb: Contact :bbbbb b bb b b bbbbbbb queryA 124:LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPN: 223 : ** ** ** ******* * * ** **** **** ******** ** ** * * ** * * * **************** * ****** **** : 8qy6_A_1 124:FPPDKPTNLTCIVNEGKNMLCQWDPGRETYLETNYTLKSEWATEKFPDCQSKHGT--SCMVSYMPTYYVNIEVWVEAENALGKVSSESINFDPVDKVKPT: 221 SecStr : EEEEEEEETTS EEEEE S SS EEEEEEE SS B EE SSSS--EEE SS TTS EEEEEEEEETTEEEE EEE GGGGEE : ExpBur :bebeebeebebbbbbeeebebebeeeeebebebebbbebeeeeeebeebebeebe--ebebebebeeeeebebbbebebeeeeeebeeeebebbeebebe: queryA 224:PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE: 323 :** **** *********** * ** *********** * * *** * * ****************** * ************** ***: 8qy6_A_1 222:PPYNLSVTNSEELSSILKLSWVSSGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDSGKGYWSDWSEEASGTTYE: 321 SecStr : EEEEEEE SS TTEEEEEEE HHHHTS EEEEEEEEETT EE GGGG SS SEEEEES TT EEEEEEEEEETT S EEEE : ExpBur :ebeebebeebeeebeebebebebebeeeebebbbbbbbbbeeeeeeeebeeeebeeeeeebebeebeeebebbbebebbbeeeeeeebeebeebebebeb: queryA 324:DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQA: 423 :**** ****** *** * ** * * ** ** *********** ** ** * *** * ********** * * ** **** ******* *: 8qy6_A_1 322:DRPSRPPSFWYKTNPSHGQEYRSVRLIWKALPLSEANGKILDYEVILTQSKSVSQTYTVTGTELTVNLTNDRYVASLAARNKVGKSAAAVLTIPSPHVTA: 421 SecStr : SS EEEEEE TT SEEEEEEEEE HHHH S EEEEEEEEE TTS EEEEESSSEEEEEEESS EEEEEEEEESS B EEEEE TT : ExpBur :eebeeebbbbbbeeebeeeeebebebbbeebeeebbbbeeebbbbebeeeeeeeeeeebeeeeeebebeeeebebbbbbebeeeebeebebbbbbeeeee: queryA 424:THPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGP: 523 : * ******** ****** * * ********** *** ****** ** ** *** * ***** **** * * *** ** ******* * **: 8qy6_A_1 422:AYSVVNLKAFPKDNLLWVEWTPPPKPVSKYILEWCVLSENAPCVEDWQQEDATVNRTHLRGRLLESKCYQITVTLVFATGPGGSESLKAYLKQAAPARGP: 521 SecStr : B EEEEEEEETTEEEEEEE SS SEEEEEEEE SSS EEEEEETT EEE S TT EEEEEEEEEETTEEEEEEEEEEESS SS : ExpBur :eeebeebeeeeeeeebebbbeebeeebebbbbbbbebeeeeeeeeebbbbeeeeeebebeeebeeeebbebbbbbbbeebbbeeeeeebbbebeebeebb: queryA 524:TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFT: 609 :************** *** *** ******** * *** * * * ************* **************************: 8qy6_A_1 522:TVRTKKVGKNEAVLAWDQIPVDDQNGFIRNYSISYRTSVGKEMVVHVDSSHTEYTLSSLSSDTLYMVRMAAYTDEGGKDGPEFTFT: 607 SecStr : EEEEEE SS EEEEE TTT S EEEEEEE SSS EEEEEETT SEEEE S TT EEEEEEEEETTEEEE EEE : ExpBur :ebeeeeeeeeebbbbbeebeeebbebebeebbbbbebeeeeeeeeebeeeeeeeebeebeeeeebbbebbbebeeeeeebeeeebe: |