Protein Model on 5f9f_K_1_NA_1 (TEMPLATE: 5f9f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) K 1 (K) polymer(polypeptide(L)) [672 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b NA 1 (K) non-polymer(ETF) TRIFLUOROETHANOL 456P 458K 724M 727T 728R 738C (identity: 100.0 %/98.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5f9f_K_1 identity=98.5%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
5f9f_K_1      12:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 111
SecStr          :   HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHHS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE GGG SSS HHHHHHT :    
ExpBur          :eeeebbebbbebbeeeebbbbbbebebeeeebbbbbbbebbeebeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeebeeeebeebbeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
5f9f_K_1     112:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 211
SecStr          :SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS      EEEEEES    TT  SHHHHHHHHHHHHHHTT  EEE :    
ExpBur          :bbbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeeebbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbbe:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************        ****************************************:
5f9f_K_1     212:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 311
SecStr          :  S HHHHHHHS   EEEEEE    S  HHHHHHHHHHHHHHHHHHHS TT --------   SSHHHHHHHHHHHHHHHT   SSHHHHHHHHHHHHHH:    
ExpBur          :beeeeeebeeebeeeeeeeeebeebeeeebbebbbebbeebbebbeeebeee--------eebeeeebeeebeebbeebbeeeeeeeeebbebbbbbbbb:    
Contact         :              b b                                                                                   

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :****************************************************************************************************:
5f9f_K_1     312:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 411
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTS   HHHHHHHHHHHHSHHHHHHHHT TT   HHHHHHHHHHHHHHHH TT  EEEE S HHHHH:    
ExpBur          :bebbeebbbbbebbeebbbebbbeebeebbeebbeeeeeebbbebbeebeeeeeebeebbeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :****************************************************************************************************:
5f9f_K_1     412:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 511
SecStr          :HHHHHHHT GGGTT  EEEE     TTSS S  HHHHHHHHHT STTSS SEEEES  SSS S     SEEEEES    HHHHHHHGGG  STT EEEEE:    
ExpBur          :bbeebbeebeebeebebbbbbeeeeeeeeeebeeeebbeeeebbeeebeebbbbbbeeebbbeebeebebbbbbbbeeebbebbbbbbbbbeeebebbbb:    
Contact         :                                                                                  b  bb         b   

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :*******************************************************  *******************************************:
5f9f_K_1     512:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 611
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHS  --   B S EEEEETTT  EEEEGGGEEEETTTEEEE SHHHHTS:    
ExpBur          :bbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeeeee--eeeeeeebbbbbbbbbbebbebeebbbbeeeebbbbeeebeee:    

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :**********************************************************************************:
5f9f_K_1     612:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 693
SecStr          :EEEEE SS    TT  EEEEEEE STTT  EEEEEEEETTEEEEEE GGGEEEEESSS  EEE SSGGG  B  EE  TT  :    
ExpBur          :beebebeeeeeeeebbbebbbebeeeebebebbbbbbbeeeebbbbebebbbbbbeeebebeeeeebeebebbeeebeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123