Protein Model on 5f9h_K_1_C_1 (TEMPLATE: 5f9h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) K 1 (K) polymer(polypeptide(L)) [637 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [647 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN 255M 280H 284K (identity: 100.0 %/93.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5f9h_K_1 identity=93.5%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
5f9h_K_1      12:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 111
SecStr          :   HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHTS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE TTTSTTS HHHHHHT :    
ExpBur          :eeeebbebbbeebeeeebbbbbbebebebeebbbbbbbebbeebeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeebeeeebeeebeeb:    
Contact         :             b                        b   b                                                         

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
5f9h_K_1     112:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 211
SecStr          :SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHTT      EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE :    
ExpBur          :bbbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeeebbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbbe:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :************************** *********************            ****************************************:
5f9h_K_1     212:VKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRDTESLAKRIXXXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 311
SecStr          :  TTHHHHTTTS   EEEEEE     - HHHHHHHHHHHHHHHHHHT ------------  SSSHHHHHHHHHHHHHHHH   SSHHHHHHHHHHHHHH:    
ExpBur          :beeeeeebeeebeebeeeeeebebbe-eebbebbbebbeebeebeeee------------eeeeeeebeeebeeebeebbeeeeeeeeebbebbbbbbbb:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :************************************  **************************************************************:
5f9h_K_1     312:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXXDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 411
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHH -- TTHHHHHHHHHHTHHHHHHHHH STT  HHHHHHHHHHHHHHHH TT  EEEE SSHHHHH:    
ExpBur          :bebbeebbbbbebbebbbbebbbeebeebbeebeee--eeebeebbeebeeebeebeebbeeeebebebbebbbebbeebbeeeeebebbbbbeeeebbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :**********************                          ****************************************************:
5f9h_K_1     412:ALKNWIEGNPKLSFLKPGILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 511
SecStr          :HHHHHHHT GGGTT   EEE  --------------------------  SEEEES  SSS S  S  SEEEEES    HHHHHHHGGGG STT EEEEE:    
ExpBur          :bbeebbeebeebeebbbbeeee--------------------------eeebebbbeeebbeeeeeebebbbbbbbebebbebbbbbbbbbeeebebbbb:    

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :*****************************************************   ********************************************:
5f9h_K_1     512:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 611
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHT ---    B S EEEEETTT  EEEETTSEEEETTTEEEE SHHHHTT:    
ExpBur          :bbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeee---eeeeeeeebebbbbbbbbebbebeebbbbeeeebbbeeeebeee:    

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :*********************************************************************************:
5f9h_K_1     612:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :EEEEE SS  EETTEEEEEEEEE STTT  EEEEEEEETTEEEEEE GGGEEEEETTT  EEE SSGGG  B  EE  TT :    
ExpBur          :beebebeeeeeeeebebebbbebeeeebebebbbbbbbeeeebbbbebebbbbbbeeeeebeeeeebeebebbeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123