Protein Model on 5f98_I_1_E_1 (TEMPLATE: 5f98 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) I 1 (I) polymer(polypeptide(L)) [647 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b E 1 (E) polymer(polypeptide(L)) [641 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN 303Y 304E 307K 315E 318G 320R 322T 323G 325S 327A 328T 332V 333P 336Q 337I 340N 880K (identity: 100.0 %/94.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5f98_I_1 identity=94.7%
queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************************************************:
5f98_I_1      10:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 109
SecStr          :     HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHTTS SS    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE TTS SSS HHHHHH:    
ExpBur          :eeeeeebbebbbeebeeeebbbbbbebebebebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeeeebebbbeeebeeeebebbbe:    
Contact         :                                                               bb  b       b  b b bb b bb   bb  bb  

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
5f98_I_1     110:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 209
SecStr          :H SEEEE HHHHHHHHHTSSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHSSS      EEEEEES    TT  SHHHHHHHHHHHHHHTT SEE:    
ExpBur          :ebebbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeeebbebbbebbebebeeeeeeebbbbbbbbbbbbeebeeeeebbeebbbbbbebebbeb:    
Contact         :b                                                                                                   

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :********************************************************     ***************************************:
5f98_I_1     210:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 309
SecStr          :E   TTHHHHHTTS   EE  EE       HHHHHHHHHHHHHHHHHHTT SS   -----   TTSSHHHHHHHHHHHHHTT   TT TTHHHHHHHHH:    
ExpBur          :bbbeeeeeebeeebeebeeeeeebeebeeeebbebbbebbbebbebbeeebeeeee-----eeeeeeeebeeebeeeeeebbeeeeeeeeebeeebbbbb:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
5f98_I_1     310:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 409
SecStr          :HHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHTTS   TTHHHHHHHHTTTHHHHHHHHH SS   HHHHHHHHHHHHHHHH TT  EEEE SSSHH:    
ExpBur          :bbbebbebbbebbebbeebbbebbbeebbeebeeebeeeeeebbeebbeebeeeeeebeebbeeeebebebbeebbebbeeebeeeeebebbbbbeeeeb:    

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :***********************                           **************************************************:
5f98_I_1     410:VDALKNWIEGNPKLSFLKPGILTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 509
SecStr          :HHHHHHHHHT STTTT    EE ---------------------------  SEEEES  SSS S  S  SEEEEET    HHHHHHHGGGG STT EEE:    
ExpBur          :bebbbebbeebeebeebebbeee---------------------------eebbebbbeeebbeeeeeebebbbbbbbeeebbbbbbbbbbbbeeebbbb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :*******************************************************    *****************************************:
5f98_I_1     510:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 609
SecStr          :EEES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH ----       EEEEETTT    EETTTEEEETTTEEEE SHHHH:    
ExpBur          :bbbbeeebeebbeebbeebebbeebbeebeeeeeeebeebbeebbeeebeeeeee----eeeeeeebbbbbbbbbeebbebeebebbeeeebbbeeeebe:    

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :***********************************************************************************:
5f98_I_1     610:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :TTEEEEE SS    TT  EEEEEEE STT   EEEEEE BTTB  EEE GGGEEEEETTT  EE  SSTTT  S   B  TT :    
ExpBur          :eebeebebeeeeeeeebebebbbebebeebebebbbebbeeeeebbbbebbbbbbebeeebebeeeeebeebebeeeebeeee:    
Contact         :                                        b

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