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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | H 1 (H) | polymer(polypeptide(L)) [672 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | |
2 | b | P 1 (H) | non-polymer(ZN) | ZINC ION | 810C 813C 864C 869C (identity: 100.0 %/99.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6kyv_H_1 identity=99.3% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :****************************************************************************************************: 6kyv_H_1 4:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 103 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHTSS TT EEEE SSHHHHHHHHHHHHHHHGGGT EEEE TTT TTS HHHHHHT : ExpBur :eeeebbebbbebbeeeebbbbbbebebebeebbbbbbeebbeeeeeeeebbbbbbbbeeebbeebeeebeebbeeeebebebbbeeebeeeebeeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441 :****************************************************************************************************: 6kyv_H_1 104:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 203 SecStr :SEEEE HHHHHHHHHHTSS GGG SEEEEETGGG SS HHHHHHHHHHHHHHSS EEEEEES SS SHHHHHHHHHHHHHHTT EEE : ExpBur :bbbbbbbebbbebbeeeebeebeebebbbbbbbbbbeeeebbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbbb: queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541 :****************************************************************************************************: 6kyv_H_1 204:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 303 SecStr : SS HHHHHHH EEEEEE S HHHHHHHHHHHHHHHHHHTT TTGGGSSS S TTSHHHHHHHHHHHHHGGG TTSSHHHHHHHHHHHH: ExpBur :beeeeebbeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebebeebebeeeebeebbeebeeebbeeeeeeeeebbebbbbbbbb: queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641 :*********************************** **************************************************************: 6kyv_H_1 304:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 403 SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH --- HHHHHHHHHHHHTHHHHHHHHH TT HHHHHHHHHHHHHHHH TT EEEE SSHHHHH: ExpBur :bebbeebbbbbebbeebebebbbeebeebbeebee---eeebeebbeebeeeeeebeebbeeeebebebbeebbebbeebbeeeeebbbbbbbeeeebbe: queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741 :****************************************************************************************************: 6kyv_H_1 404:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 503 SecStr :HHHHHHHT GGGTT EEEE TTSS S HHHHHHHHHTBSSSSSBSEEEE SS S SEEEEES HHHHHHGGGG STT EEEEE: ExpBur :bbeebbeebeebeebebbbbbeeeeeeeeeebeeeebeeebeebeeebeebbbbbbeeeeeeeebeebebbbbbbbebebbebbbbbbbbeeeebebbbb: queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841 :***************************************************** *********************************************: 6kyv_H_1 504:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 603 SecStr :ES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHT -- S EEEEETTT EEEETTTEEEETTTEEEE SSSGGGS: ExpBur :bbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeee--eeeeeeeeebebbbbbbbbebbebeebebbeeeebbbeeeebeee: Contact : b b queryA 842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 918 :*****************************************************************************: 6kyv_H_1 604:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 680 SecStr :EEEEE SS EETTEEEEEEEEE GGG EEEEEEE SS EEEEE GGGEEEEETTT EEE SSGGGS S EE : ExpBur :beeeebebeeeeeebebebbbbbeeeebebebbbebebeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeee: Contact : b b |