Protein Model on 5f9h_G_1_X_1 (TEMPLATE: 5f9h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) G 1 (G) polymer(polypeptide(L)) [653 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b X 1 (G) non-polymer(MG) MAGNESIUM ION 636T 639L (identity: 100.0 %/95.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5f9h_G_1 identity=95.6%
queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************************************************:
5f9h_G_1      10:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 109
SecStr          :     HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHHS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE TTT TTS HHHHHH:    
ExpBur          :eeeeeebbebbbebbeeeebbbbbbebebebebbbbbbbbebbeebeeeeebbbbbbbeeeebbeebeeebeebbeeeeeebebbbeeebeeeebeeebe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
5f9h_G_1     110:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 209
SecStr          :T SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS      EEEEEES    TT SSHHHHHHHHHHHHHHHT SEE:    
ExpBur          :ebbbbbbbbebbbebbeeeebeebeebebbbbbbbbbbeeeebbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbb:    

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :****************************************************          **************************************:
5f9h_G_1     210:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 309
SecStr          :E   TTHHHHHHHS   EEEEEE    S  HHHHHHHHHHHHHHHHHHTT  ----------  SSSHHHHHHHHHHHHHTTS   SSHHHHHHHHHHHH:    
ExpBur          :bebeeeeeebeeebeebebeeeebeebeeebbeebbbebbeebeebeeeeee----------eebbeeebeeebeeeeeebbeeeeeeeeebbebbbbbb:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
5f9h_G_1     310:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 409
SecStr          :HHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHT   HHHHHHHHHHHHHHHHHHHHHT GGG  HHHHHHHHHHHHHHHH SS  EEEE SSHHH:    
ExpBur          :bbbebbeebbbbbebbebbbbebbbeebeebbeebbeeeeeebbeebbbebeeeeeebeebeeeeebebbbbebbbebbeebbeeeeebbbbbbbeeeeb:    
Contact         :                                                                                                b  b

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :*************************                ***********************************************************:
5f9h_G_1     410:VDALKNWIEGNPKLSFLKPGILTGRXXXXXXXXXXXXXXXXILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 509
SecStr          :HHHHHHHHHT GGGTT   EEE   ----------------  SSSSSSSS SEEEES  SSS S     SEEEEES    HHHHHHHGGGG STT EEE:    
ExpBur          :bebbeebbeebeebeebbbbebeee----------------eeeebbeeeeeebbbbbeeebbbeebeebebbbbbbbeeebbebbbbbbbbeeeebebb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :******************************************************    ******************************************:
5f9h_G_1     510:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSXXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 609
SecStr          :EEES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHH ----    B S  EEEETTT  EEEETTTEEEETTTEEEE SSSGG:    
ExpBur          :bbbbeebbbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeee----eeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebe:    

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :***********************************************************************************:
5f9h_G_1     610:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :GSEEEEE SS  EETTEEEEEEEEE GGG   EEEEEEEETTEEEEEE GGGEEEEETTTTEEEE SSGGG  B   B  TT :    
ExpBur          :eebeeeebeeeeeeeebebebbbbbeeeebebebbbebbbeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123