Protein Model on 8hf1_G_1_M_1
(TEMPLATE: 
8hf1
)Protein Model on 8hf1_G_1_M_1
(TEMPLATE: 8hf1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | G 1 (G) | polymer(polypeptide(L)) [1561 aa] | Dicer-2, isoform A :A1ZAW0_DROME | |
| 2 | b | M 1 (M) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*CP*AP*AP*GP*UP*CP*UP*CP*UP*U)-3') | 298N 299Q(T) 300I(V) 301P(E) 321V 325S(D) 347T 349Q 350I(V) 482T(S) 483E(K) 492D(Q) 635K(E) 636T(R) 637R 663G 664R 697T(S) 698S 699V 702E (identity: 47.6 %/29.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8hf1_G_1 identity=29.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335
:*** *** * * * *** ***** * * * ** * * ** * * * * *:
8hf1_G_1 6:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 104
SecStr : HHHHHH-HHHHHHS EEE SSHHHHHHHHHHHHHT SSSSS TTTT EEEEE SSHHHHHHHHHHHHHH SS EEEE GGGTGGG HHHHHHH:
ExpBur :eeeebbeeb-beebeebbbbbbbeebebbbbbbbbbbbeeeeebeeeeeeebebbbbbbeebebbebbbebbeeebebebbbbbeeeebeebeeeebeeb:
Contact : bbbb bbb b
queryA 336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411
: * * * * ** * **** ** * * * ** * *** :
8hf1_G_1 105:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 195
SecStr :--HHH SEEEE HHHHHHHHHT-TSS GGGEEEEEEESGGG TT HHHHHHHHTTTS GG------G EEEEEES SS SSHHHHHHHHHHHTT:
ExpBur :--beebbbbbbbbebbbebebb-eebebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbbbbbeeeebeebeeebeebbbbbb:
Contact : b bb
queryA 412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500
: * * * * * * * *** * * * * * ** * * * * *:
8hf1_G_1 196:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 286
SecStr :S EE SHHHHHHHHHH----- EEEEEEE ---- HHHHHHHHHHHHHHHHHHT S B TTSSSB HHHHHHHHHHHHHHHH:
ExpBur :bbbbbbeeeebeeebeeb-----beebeeeeebbeee----eeeeebbeebeeebeebbeebeeeebeebeeeeeeebeeeeeeeebbebeebbebbeeb:
Contact : bb b b
queryA 501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594
: * * * * * * ** * * * * * *** :
8hf1_G_1 287:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 369
SecStr :HHHHBSHHHHHHHHHH---HHHHHHHHHT HHHHHH---------HHHHHHHHHHHHHH-HHHHHHHHGGG S HHHHHHHHHHHSB HHHHHH----:
ExpBur :beebbbbbbbbbbbbb---bbbbbeeeeebebebbeeb---------beebbeebeebeeb-beebbeeebeeeeeeeebbbebbbebbbbbbeeb----:
queryA 595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687
: * * ** * * ** * * * * * * * * ** * ** * :
8hf1_G_1 370:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 450
SecStr :--HHHHHHHSSS GG--G --------------EEEE SSHHHHHHHHHHHHHHHTT TTTTTT EEEE SSS S SS S S HHHHHH-:
ExpBur :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebbeebeeeeeeeeeeebeebbe-:
Contact : bbb bb
queryA 688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
: * * * ** **** ** * * * ** * * * * :
8hf1_G_1 451:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 507
SecStr :HTS EEEESSSTTSS SEEEE S HHHHHHHHHH STT EEEEEEES:
ExpBur :eeebbbbbbbebbbebbebeebebbbbbbebeebbbbbbbeebbeeeebebbbbbbe:
Contact : bbb b
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[assembly_id:1]
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