[pdbjlvh2]Protein Model on 8hf1_G_1_F

Protein Model on 8hf1_G_1_F_1 (TEMPLATE: 8hf1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	G 1 (G)	polymer(polypeptide(L)) [1561 aa]	Dicer-2, isoform A :A1ZAW0_DROME
2	b		F 1 (F)	polymer(polypeptide(L)) [126 aa]	LD06392p :Q9VLW8_DROME	438V 439I(M) 440A(V) 441T(S) 589R (identity: 40.0 %/29.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8hf1_G_1 identity=29.7%

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335
                :*** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *   *    *      *:
8hf1_G_1       6:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 104
SecStr          :   HHHHHH-HHHHHHS  EEE  SSHHHHHHHHHHHHHT SSSSS TTTT  EEEEE SSHHHHHHHHHHHHHH SS EEEE GGGTGGG  HHHHHHH:    
ExpBur          :eeeebbeeb-beebeebbbbbbbeebebbbbbbbbbbbeeeeebeeeeeeebebbbbbbeebebbebbbebbeeebebebbbbbeeeebeebeeeebeeb:    

queryA       336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411
                :     *     * *         *   **     * ****     **    *  *    *        ** * ***                        :
8hf1_G_1     105:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 195
SecStr          :--HHH SEEEE HHHHHHHHHT-TSS GGGEEEEEEESGGG  TT HHHHHHHHTTTS GG------G  EEEEEES    SS  SSHHHHHHHHHHHTT:    
ExpBur          :--beebbbbbbbbebbbebebb-eebebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbbbbbeeeebeebeeebeebbbbbb:    

queryA       412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500
                :     * * *       *     *     *     *     ***           *    *     *  *  *   **        *   * * *    *:
8hf1_G_1     196:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 286
SecStr          :S EE   SHHHHHHHHHH-----    EEEEEEE   ----    HHHHHHHHHHHHHHHHHHT   S     B TTSSSB   HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbeeeebeeebeeb-----beebeeeeebbeee----eeeeebbeebeeebeebbeebeeeebeebeeeeeeebeeeeeeeebbebeebbebbeeb:    
Contact         :                             bbbb                                                                   

queryA       501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594
                :  * *       *         *       *    *              **   *  *       * *             *          ***    :
8hf1_G_1     287:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 369
SecStr          :HHHHBSHHHHHHHHHH---HHHHHHHHHT   HHHHHH---------HHHHHHHHHHHHHH-HHHHHHHHGGG S HHHHHHHHHHHSB HHHHHH----:    
ExpBur          :beebbbbbbbbbbbbb---bbbbbeeeeebebebbeeb---------beebbeebeebeeb-beebbeeebeeeeeeeebbbebbbebbbbbbeeb----:    
Contact         :                                                                                              b     

queryA       595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687
                :  * *         **  * *                 **  *         * * *   * *   * *    **          *    **     *  :
8hf1_G_1     370:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 450
SecStr          :--HHHHHHHSSS  GG--G  --------------EEEE SSHHHHHHHHHHHHHHHTT TTTTTT  EEEE SSS   S SS  S  S    HHHHHH-:    
ExpBur          :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebbeebeeeeeeeeeeebeebbe-:    

queryA       688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
                : *  *  *  **  ****   ** *     *       *  ** *    *  * *  :
8hf1_G_1     451:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 507
SecStr          :HTS  EEEESSSTTSS      SEEEE S    HHHHHHHHHH  STT EEEEEEES:    
ExpBur          :eeebbbbbbbebbbebbebeebebbbbbbebeebbbbbbbeebbeeeebebbbbbbe:

Protein Model on 8hf1_G_1_F_1 (TEMPLATE: 8hf1 )

Input Residue Numbers for Focused Sites