[pdbjlvh2]Protein Model on 6kyv_F_1_O

Protein Model on 6kyv_F_1_O_1 (TEMPLATE: 6kyv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [672 aa]	Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2	b		O 1 (F)	non-polymer(ZN)	ZINC ION	810C 813C 864C 869C (identity: 100.0 %/99.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6kyv_F_1 identity=99.3%

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
6kyv_F_1       4:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 103
SecStr          :   HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHSS SS    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE SSS SSS HHHHHHH :    
ExpBur          :eeeebbebbbebbeeeebbbbbbebebebeebbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeebbeeeebebebbbeeebeeeebeeebeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
6kyv_F_1     104:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 203
SecStr          :SEEEE HHHHHHHHHTTSS  GGG SEEEEETGGG SSS HHHHHHHHHHHHHHSS  S   EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE :    
ExpBur          :bbbbbbbebbbebbeeeebeebeebebbbbbbbbbbeeeeebbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbbb:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************************************************************:
6kyv_F_1     204:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 303
SecStr          :  TTHHHHHTTS   EEEEEE    S  HHHHHHHHHHHHHHHHHHTTS  GGGTSS  S  TTSHHHHHHHHHHHHHHTT   TTSSHHHHHHHHHHHH:    
ExpBur          :beeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebebeeeebeeeebbebbeebbeebbeeeeeeeeebbebbbbbbbb:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :***********************************   **************************************************************:
6kyv_F_1     304:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 403
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH  --- HHHHHHHHHHHHHHHHHHHHHH TT   HHHHHHHHHHHHHHHH TT  EEEE SSHHHHH:    
ExpBur          :bebbeebbbbbebbbebbbebbbeebeebbeeeee---eeebeebbeebeeeeeebeebeeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :****************************************************************************************************:
6kyv_F_1     404:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 503
SecStr          :HHHHHHHT GGGTT  EEEE     TTSS S  HHHHHHHHTTSSSSSS SEEEE    SS S     SEEEEES    HHHHHHGGGG  STT EEEEE:    
ExpBur          :bbeebbeebeebeebebbbbbeeeeeeeeeebeeeebeebbebbeeeeeebbbbbbeeebeeeebeebebbbbbbbeeebbebbbbbbbbbeeebebbbb:    

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :*****************************************************  *********************************************:
6kyv_F_1     504:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 603
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHT --         EEEEETTT  EEEEGGGEEEETTTEEEE SSSGGGT:    
ExpBur          :bbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeee--eeeeeeebebebbbbbbbbebbebeebebbeeeebbbeeeebeee:    
Contact         :                                                                    b  b                            

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 918
                :*****************************************************************************:
6kyv_F_1     604:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 680
SecStr          :EEEEE SS  EETTEEEEEEEEE GGG   EEEEEE  SS   EEE GGGEEEEETTT  EE  SSSTT  S  EE :    
ExpBur          :beeeebebeeeeeebebebbbbbeeeebebbbbbbbbeeeeebbbbebebbbbbeeeebebeeeeebeebebeeeee:    
Contact         :                      b    b

Protein Model on 6kyv_F_1_O_1 (TEMPLATE: 6kyv )

Input Residue Numbers for Focused Sites